Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1113 ATGGTTGGATCCTGCTGGAAACCATCTGAAGAAGGTGAAGATGGAGACTTTAACGGGAAAGTCGATGGATTGCTGTGGTATCAGGATTTGGGTAAGCTTGTGTACGGAGAATTCTCCATGGCTGTAATTCAGGCCAATAATTCATTGAAGGATCGAAGCCAACTCGGATCTGGACCCTTCACTTCCAACCATTTGGGTCCTCAAGGAACCTTCATGGTGTCTATGACGGCCATGGCGGATCAGAGGCCTCCCAGTTCGTCGCGGACAATCTCTTCTTCCATCTCAAGATGTCTCGACTCGAACTCGAGACCCACACCGTTAGACCAATTCTGTTTTGGGTTTGTGAGTGAGAAGCAAGGGGTGTCAGAAGATGTGATAAAGAGAGCATTTTATGCAACGGAAGGGGAATTTCTCTCTGTTGGGAAGAAGCAGTGGCTAAGTTGGCCAGAGATTGCATCCACAGGAACATGTTGCTTGGTGGGGATAATCAGGAACGACATGATATATGTTGCAAATGCTGGGGATTCTCGGGGGGTTTTAGGAAGAGAAGATAAAGCAACCAAAGATATGGAAGCTATCCAATTATCTGCAGAACACAATGTCAACATTGAAACTGTTTCAAAATCCATTGGCGATGCGTATTTGAAGAGGATGGAATTTAACAGAGAGCCTCTACCATTAAAGTATATATTGCCTGAACCCATGTTTAAGCCGATTCTTAGTTGTGAGCCATCAATATCAACTCATAAACTTGAAGCAAGGGATCAATTTCTCATCTTTGCTTCTGATGGATTATGGGAGCATCTGAGCAACCAAGAGCCTGTGAACATCGGGATTGCAAGGAGGCTTGTGAAGGCAGCACTTAGAGAAGCAGCGAGGAAGAGAGAGATGAGATTGTCGGATCTCCAAAAGATAGAACAAGGAGTGAGCAGACACTTCCATGATGATATAACTGTAATTGTTGTGTTTCTAGATCCCAAACTCACTCATAATAATGGCCCTCTCTGCGACCTTCCCCTTTCAATCAGAGCAGGTGGTGGCTCCGCCAACTTTTAA 1056 0.4498 MVGSCWKPSEEGEDGDFNGKVDGLLWYQDLGKLVYGEFSMAVIQANNSLKDRSQLGSGPFTSNHLGPQGTFMVSMTAMADQRPPSSSRTISSSISRCLDSNSRPTPLDQFCFGFVSEKQGVSEDVIKRAFYATEGEFLSVGKKQWLSWPEIASTGTCCLVGIIRNDMIYVANAGDSRGVLGREDKATKDMEAIQLSAEHNVNIETVSKSIGDAYLKRMEFNREPLPLKYILPEPMFKPILSCEPSISTHKLEARDQFLIFASDGLWEHLSNQEPVNIGIARRLVKAALREAARKREMRLSDLQKIEQGVSRHFHDDITVIVVFLDPKLTHNNGPLCDLPLSIRAGGGSANF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1113 351 CDD PP2Cc 107 324 IPR001932 -
Lele08g1113 351 SMART PP2C_4 62 322 IPR001932 -
Lele08g1113 351 SUPERFAMILY PP2C-like 116 325 IPR036457 -
Lele08g1113 351 Gene3D - 205 332 IPR036457 -
Lele08g1113 351 Gene3D - 37 204 IPR036457 -
Lele08g1113 351 Pfam Protein phosphatase 2C 121 202 IPR001932 -
Lele08g1113 351 Pfam Protein phosphatase 2C 206 294 IPR001932 -
Lele08g1113 351 MobiDBLite consensus disorder prediction 81 100 - -
Lele08g1113 351 PANTHER PROTEIN PHOSPHATASE 28 322 - -
Lele08g1113 351 ProSiteProfiles PPM-type phosphatase domain profile. 1 324 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1113 Lele-ChrLele08 7002030 7003478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1113 1 349 PP2C-type Phosphatase Gene Family AT3G12620 50.386 2.63e-117 343