Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1107 ATGGATGTTAAGGAAGCAGAAAGGGTAGTTGTTGCAAAACCAGTAGCTTCAAGGCCTACGTGCCCACCTTTTAGATCCTTCTCCGAGCTACTTGCAGGTGCCATCAATGCCTCTCCATCTAGTGAATCTTCTCAAGCCACAGTTTCAGCCATTAGACCAAAGACTGTGAGGTTCAAGCCAGCCATGAATCGACCGCCTCCTGCCGGATTTATTTCTTCCGAGGCTAACCCATCTTGCAAAAGTCATAAACCAGACACTAATCAAACAGTCGTTTACAAGCCTACGGCTAAGCTTGTCTCCAAGGCCACTGTTTCTCTTCTGGCAAATATGGGAAATTATAGTACCAGCCATAGCCAGCCGTTTCAACATCCAAATAAGGAGAATCCGAGGACCAATTTGAGCTCAATGAATCATCAGAACAATAACACCCCACGTGCTGAATCAAATCTGGCAGTTGAATCTTTCAAGATGGTACAGCAGAGCCCAGAAGAGGACCAGAAAACTTCACCATCTACTAGTAATGGTGGTGATAGACCTTGTTATGATGGGTATAACTGGAGGAAATATGGTCAGAAGCAAGTAAAAGGAAGCGAGTATCCGAGGAGTTATTACAAATGCACGCATCCTAATTGCCCAGTGAAGAAGAAAGTTGAAAGATCATTTGATGGGCAGATTGCAGAAATTGTGTATAAAGGGGAACACAACCATTCAAAGCCTCATCCTCCTAAGCGCAACTCAACAGGAGGAACACAAGGATCAGGAATCGTGCCAGATGGATTTAATCAAGATACTAATTGTAATAACAACCATTTATGGGGTAATCCTAACAATGAGAGGAATGAAAATAGAATAGAGAGCCAGAGTGAGGCAGGTTATCTTGTCAAAGCTGGAGGAAGCCCTGAGAATTCGTGTGCTCAAAGTGAGGAATGTGAGGAAGGAAACAAGGGAAATGAAGTGGAGGAAGATGAAAAACCAAAAAGTTTTTCAATAAACACGGTTGATCTTTCATTCAGTAAAAAAGAGAATAAATCCAATGAAGTAGCATTAGCAGTAGCAGGGGAAGGTTTAGTGGAGCCTCAAGTGGTGGTTCAGAGTTCTACAGATTCTGAAGTACTCGGAGACGGCTTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGAAACCCATATCCCAGAAGTTATTACAGATGCACTAACATAAAGTGCAGTGCCCGGAAACATGTGGAAAGATCAACAGATGATCCAAAAGCATTTATCACTACTTATGAAGGGAAACACAACCATGAGATGCCACGTAAAACTATAGGTTCTGTGGCCTCTGAAAACGTCAAGCCATGA 1341 0.4318 MDVKEAERVVVAKPVASRPTCPPFRSFSELLAGAINASPSSESSQATVSAIRPKTVRFKPAMNRPPPAGFISSEANPSCKSHKPDTNQTVVYKPTAKLVSKATVSLLANMGNYSTSHSQPFQHPNKENPRTNLSSMNHQNNNTPRAESNLAVESFKMVQQSPEEDQKTSPSTSNGGDRPCYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQIAEIVYKGEHNHSKPHPPKRNSTGGTQGSGIVPDGFNQDTNCNNNHLWGNPNNERNENRIESQSEAGYLVKAGGSPENSCAQSEECEEGNKGNEVEEDEKPKSFSINTVDLSFSKKENKSNEVALAVAGEGLVEPQVVVQSSTDSEVLGDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCSARKHVERSTDDPKAFITTYEGKHNHEMPRKTIGSVASENVKP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1107 446 MobiDBLite consensus disorder prediction 114 178 - -
Lele08g1107 446 MobiDBLite consensus disorder prediction 242 281 - -
Lele08g1107 446 MobiDBLite consensus disorder prediction 114 185 - -
Lele08g1107 446 ProSiteProfiles WRKY domain profile. 182 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g1107 446 MobiDBLite consensus disorder prediction 231 281 - -
Lele08g1107 446 MobiDBLite consensus disorder prediction 294 327 - -
Lele08g1107 446 MobiDBLite consensus disorder prediction 37 88 - -
Lele08g1107 446 Pfam WRKY DNA -binding domain 374 430 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g1107 446 Pfam WRKY DNA -binding domain 182 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g1107 446 MobiDBLite consensus disorder prediction 37 51 - -
Lele08g1107 446 SUPERFAMILY WRKY DNA-binding domain 179 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele08g1107 446 MobiDBLite consensus disorder prediction 311 327 - -
Lele08g1107 446 ProSiteProfiles WRKY domain profile. 367 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g1107 446 SUPERFAMILY WRKY DNA-binding domain 366 432 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele08g1107 446 MobiDBLite consensus disorder prediction 74 88 - -
Lele08g1107 446 Gene3D WRKY domain 156 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele08g1107 446 Gene3D WRKY domain 357 433 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele08g1107 446 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 103 434 IPR044810 GO:0003700
Lele08g1107 446 MobiDBLite consensus disorder prediction 425 446 - -
Lele08g1107 446 SMART WRKY_cls 372 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g1107 446 SMART WRKY_cls 180 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g1107 446 FunFam WRKY transcription factor 165 240 - -
Lele08g1107 446 FunFam WRKY transcription factor 360 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1107 Lele-ChrLele08 6971772 6973472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1107 364 446 WRKY Transcription Factor Family AT2G37260 45.455 2.89e-15 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele08g1107 WRKY 8.3e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1107 08 6971772 6973472 Lele13g1811 13 26216577 26218787 CCT
Lele08g1107 08 6971772 6973472 Lele14g1753 14 24604041 24607574 CCT
Lele08g1107 08 6971772 6973472 Lele15g0597 15 3513599 3515784 CCT
Lele08g1107 08 6971772 6973472 Lele16g0611 16 3439581 3441773 CCT
Lele05g1254 05 7845020 7846663 Lele08g1107 08 6971772 6973472 hybridization
Lele06g1119 06 6963173 6964876 Lele08g1107 08 6971772 6973472 hybridization