Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1105 ATGATCCGCCTGGTGAGGCCCAAATCCTCCATCACGGGCTTGGCGAGGAGGTGCGTATCTGCATCTGCTGCGTCCGGTGCCAATTCTCACCCGCCTCCGTACAATACCTCTTCCATCCATCTGAAACCTCAGCTTTCAAGTAAAGGTCAGGAGGAGGACAGGAATGCTCAGTGGGTCTTTTTGGGTTGTCCCGGCGTCGGCAAAGGCACCTACGCTAGCCGCCTCTCTACTTTAATCGGTGTCCCTCACGTCGCCACCGGCGATCTCGTTCGCGAAGAGCTCGCGTCCTCTTGCCCCCTTTCTGCCCAGCTGTCAGAAATTGTAAATCAAGGTAAATTGGTCTCGGATGAAATCATAATCAGTTTATTATCAAAGAGACTGGCTGCTGGGAAAGCTAAAGGCGAATCAGGATTTATTCTTGACGGGTTTCCTCGAACAATTAGGCAAGCAGAAATATTGGAAGGGCTAACTGACATTGACTTGGTAGTCAATCTGAAGCTTCGAGAAGATGTACTTCTAGAGAAATGCCTCGGTAGGAGAATTTGCAGCCAGTGTGGGGGAAATTTTAACGTGGCCTCCATTGACATCAAGGGTGAGAATGGGAATCCTGGCATTATCATGGCCCCACTTCTTCCCCCTGCCCATTGTATGTCAAAGCTTATTACTCGTTCAGATGATACTGAAGCAGTAGTCAAAGAAAGGCTTCGTATATACAATGAAAAGAGCCAACCTGTGGAGGAGTTCTACCGCAGTCGAGGCAAACTGTTGGAGTTTGAACTACCAGGAGGGATCCCAGAATCTTGGCCAAAGTTGCTGCAAGCACTTAATCTCGATGATTATGAGGACAAGCGATCTGCTGCAGCATAA 867 0.4902 MIRLVRPKSSITGLARRCVSASAASGANSHPPPYNTSSIHLKPQLSSKGQEEDRNAQWVFLGCPGVGKGTYASRLSTLIGVPHVATGDLVREELASSCPLSAQLSEIVNQGKLVSDEIIISLLSKRLAAGKAKGESGFILDGFPRTIRQAEILEGLTDIDLVVNLKLREDVLLEKCLGRRICSQCGGNFNVASIDIKGENGNPGIIMAPLLPPAHCMSKLITRSDDTEAVVKERLRIYNEKSQPVEEFYRSRGKLLEFELPGGIPESWPKLLQALNLDDYEDKRSAAA 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1105 288 Pfam Adenylate kinase 61 253 - -
Lele08g1105 288 PRINTS Adenylate kinase signature 59 72 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele08g1105 288 PRINTS Adenylate kinase signature 87 101 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele08g1105 288 PRINTS Adenylate kinase signature 138 154 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele08g1105 288 PRINTS Adenylate kinase signature 240 254 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele08g1105 288 PRINTS Adenylate kinase signature 223 238 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele08g1105 288 CDD ADK 57 259 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele08g1105 288 ProSitePatterns Adenylate kinase signature. 138 149 IPR033690 -
Lele08g1105 288 TIGRFAM adk: adenylate kinase 57 276 IPR006259 GO:0004017|GO:0005524|GO:0016776
Lele08g1105 288 PANTHER NUCLEOTIDE KINASE 36 272 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele08g1105 288 MobiDBLite consensus disorder prediction 23 47 - -
Lele08g1105 288 Hamap Adenylate kinase [adk]. 56 276 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele08g1105 288 Gene3D - 42 279 IPR027417 -
Lele08g1105 288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 276 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1105 Lele-ChrLele08 6959813 6962605 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1105 08 6959813 6962605 Lele08g1105 08 6959813 6962605 ECH
Lele05g1252 05 7823308 7827850 Lele08g1105 08 6959813 6962605 hybridization
Lele06g1117 06 6953082 6955864 Lele08g1105 08 6959813 6962605 hybridization