Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1083 ATGGTTTCTGCAGAAAGATCAAAGAAGAAATCCCAGATATGGAAGAAAGCCATGATTCACTTTTCTCTGTGTTTCGCAATGGGTTTTTTCACTGGCTTCGCTCCCACAGGTAAATCTTCAACCTTCTCTTTTTCCCCAATCGCCACCTCCAATAGACAAGATTTTGCTTCACAGCCTCTGCAAGTGGGGAACCGGACAGTACATGGCAACACAAATTCGATTGCTCCGAGGTCGGAGGGCGAGCCAACGATGCCCAGATTCCTCAAACACAAAAAGAATCTCCGTGAGAAACCAGAGCCCGAGTTGAAACCTCATAGGCTGCTAATTATTGTCACTCCAACGAGCACTAAACTTAGGTTTCAAGGGGTGTATCTGAGAAAGTTGGCCAACACTATAAAGCTGGTTGCTCCTCCATTGGTGTGGATTGTGGTGGAACCACAAACGGAGTCCACAGAAGTGTCGGAGATGATGAGGAAGACAGGAATCATGTATCGACATTTGGTTTCTAAGGAAAACTTCACGGACTTGGAAGCAGAACTAAATCACCAGAGGAATCTCGCACTAAAGCACATTGAGCATCACAGGCTAAGTGGGATCGTGCACTTTGCTGGGCTTTCCAATGTTTATGATCTGGAATTCTTCCACCACCTTAGAGATATTAAGATGTTTGGGGCATGGCCGATGGCAATGGTAAAAGCGAATAGGAAGAAAGTGAAGATGGAAGGACCAGTGTGCGATTCTTCGCAGGTTATAGGTTGGCATCTGAGGAATAAGAACAATGAAACAGATATGTTGAGTTCTCAAATTCGTATTTCGAGTTTGGCATTCAATAGTTCCATCCTCTGGGATCCTGAGAGATGGGGTCGCGCTTCACCTGTTCAAGACCCCTCTCAGAATTCATTAAAGTTGGTGAAGCAAGTGATTCTGGAAGACGAGTCAAAGTTGAAGGGAATTCCGCCAGATGATTGCTCCAGAATCTTGCTCTGGCGTTTTAATTTTCATGCTCAACCCACTCTCAAACGTCATGTTTTGAGAACTTTATCATAA 1047 0.447 MVSAERSKKKSQIWKKAMIHFSLCFAMGFFTGFAPTGKSSTFSFSPIATSNRQDFASQPLQVGNRTVHGNTNSIAPRSEGEPTMPRFLKHKKNLREKPEPELKPHRLLIIVTPTSTKLRFQGVYLRKLANTIKLVAPPLVWIVVEPQTESTEVSEMMRKTGIMYRHLVSKENFTDLEAELNHQRNLALKHIEHHRLSGIVHFAGLSNVYDLEFFHHLRDIKMFGAWPMAMVKANRKKVKMEGPVCDSSQVIGWHLRNKNNETDMLSSQIRISSLAFNSSILWDPERWGRASPVQDPSQNSLKLVKQVILEDESKLKGIPPDDCSRILLWRFNFHAQPTLKRHVLRTLS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1083 348 SUPERFAMILY Nucleotide-diphospho-sugar transferases 106 337 IPR029044 -
Lele08g1083 348 Pfam Glycosyltransferase family 43 128 332 IPR005027 GO:0015018|GO:0016020
Lele08g1083 348 MobiDBLite consensus disorder prediction 63 84 - -
Lele08g1083 348 MobiDBLite consensus disorder prediction 63 78 - -
Lele08g1083 348 FunFam Glycosyltransferases 106 346 - -
Lele08g1083 348 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 12 334 IPR005027 GO:0015018|GO:0016020
Lele08g1083 348 CDD GlcAT-I 106 333 IPR005027 GO:0015018|GO:0016020
Lele08g1083 348 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 105 345 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1083 Lele-ChrLele08 6829534 6831825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1083 1 333 Glycosyltransferase AT2G37090 57.143 2.66e-137 392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1083 08 6829534 6831825 Lele08g1083 08 6829534 6831825 ECH
Lele05g1231 05 7704496 7706363 Lele08g1083 08 6829534 6831825 hybridization
Lele06g1096 06 6817009 6818771 Lele08g1083 08 6829534 6831825 hybridization