Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1076 ATGGCCGATGACTTTGATTTTGCCAATAAAGTTCCTCCTTCTTTCGATCGCGTGGGAGATGTGATTAAGAATTCTGAAGCCAAAGGTTTCAATCCAGGATTAATAGTTCTCCTGGTTGTTGGTGGGCTGCTATTGGCATTCCTCATTGGGAATTATGCCCTTTACATATATGCGCAGAGAACCCTTCCTCCTAGAAAAAAGAAGCCAGTCTCTAAGAAGAAGATGAAGAGGGAGAGACTGAAGCAAGGCGTTTCTGCACCTGGAGAGTAG 270 0.4444 MADDFDFANKVPPSFDRVGDVIKNSEAKGFNPGLIVLLVVGGLLLAFLIGNYALYIYAQRTLPPRKKKPVSKKKMKRERLKQGVSAPGE 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1076 89 MobiDBLite consensus disorder prediction 65 79 - -
Lele08g1076 89 MobiDBLite consensus disorder prediction 64 89 - -
Lele08g1076 89 Pfam DNA binding protein S1FA 25 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Lele08g1076 89 PANTHER DNA-BINDING PROTEIN S1FA2 1 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1076 Lele-ChrLele08 6805140 6806321 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Lele08g1076 S1FA 6.7e-41 No_clan