Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1068 ATGGAGAGAGATCCTAACTTGGAAATTCAACTCCCTCCTGGATTTAGATTCCACCCTTCTGACGAGGAGCTCATTGTTCACTACCTCAGAAACAAAGTGACCTCATGTCCCCTCCCTGCTTCATTCATTGCAGACATAGATCTCTATAAGTTCAACCCATGGGAGCTTCCAAGAAAGGCTTTGTTTGGAGGGGATGAGTGGTTTTTCTTTACTCCGAGGGATAGAAAGTATCCCAATGGGTTGAGACCTAATAGAGCAGCTGGGTCAGGTTATTGGAAGGCAACGGGGACTGATAAACCTATTCTTACTTCGTGTGGAATGAAGAGCATTGGAGTGAAGAAAGCCCTTGTGTTCTACAAGGGTCGTCCCCCTAAAGGATCTAAAACCGATTGGACCATGCATGAGTATAGGTTGCTCGATTCAATGATCTTGAGTTACAAGCAAAGAGGGTCTATGAGACTGGATGATTGGGTGCTGTGTAGGGTTCGTCAAAAGATCAGCAGCCCTAGAAGCACTACTTGGGGGGAGTCGAATGAACCTAGTTATGAACCTGCGAGATACTCGCAACAACAGATGAATTATGAGAGTCCTGATGCTGATGAAACTGTCAAAAACCGTGTGTTCAATGAATTTCCCATGTTGCCATACATTCTAGCATCTAAGACGAATAATAATACTCTTCCTTCCATGGGAAATGCATCATTAAGCTTAAGCAGCTATCAGCGTAATGATAATTCTTTTGTCCATGAAGAAGACACCTCAAACATACAGGCACAGTTCTCAGAATCTACTGCTGATGATGAGAGCTTGAAGAGAAAACTTTATGAACAAAGCCGAATGGACCTGTATGATTCTCCTCCCTTTAAAAAGCTAATAAGAGAGGAAGATCATGAGAGGGACATGCTAGACATAGACGTAAGCAAAAGCTACAGCAGTGGTTTCAACAGCTTTGATCATTGGAACGCCATCATACATCCTCAAGAGCTTGATAACTTGGCCTTATCAGGATATATTTGA 1017 0.4297 MERDPNLEIQLPPGFRFHPSDEELIVHYLRNKVTSCPLPASFIADIDLYKFNPWELPRKALFGGDEWFFFTPRDRKYPNGLRPNRAAGSGYWKATGTDKPILTSCGMKSIGVKKALVFYKGRPPKGSKTDWTMHEYRLLDSMILSYKQRGSMRLDDWVLCRVRQKISSPRSTTWGESNEPSYEPARYSQQQMNYESPDADETVKNRVFNEFPMLPYILASKTNNNTLPSMGNASLSLSSYQRNDNSFVHEEDTSNIQAQFSESTADDESLKRKLYEQSRMDLYDSPPFKKLIREEDHERDMLDIDVSKSYSSGFNSFDHWNAIIHPQELDNLALSGYI 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1068 338 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Lele08g1068 338 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Lele08g1068 338 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Lele08g1068 338 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 257 - -
Lele08g1068 338 FunFam NAC domain-containing protein 72-like 20 170 - -
Lele08g1068 338 SUPERFAMILY NAC domain 9 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1068 Lele-ChrLele08 6776696 6777955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1068 10 172 NAC Transcription Factor Family AT1G61110 67.251 2.15e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele08g1068 NAM 4.5e-37 No_clan