Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1062 ATGAAGATTCCTCATTCATTTCTCGCTTGTTTCTCAGCAACCGTCAAAGAACCAAGACAGATCGATGACCCAGAAGGAGGCAGCAGCGAAGCACTTCGTGTATTCTCTCGCATCGAATTGAAATTAGCCACTCGTGGTTTCAATTCCTGGGACAAGATTGGAGAAGGCGGATTCGGTTCTGTTTACAAGGGCCAGCTTCGGGACGGCAAAATCGTAGCCGTGAAAGTGCTTTCAATCGAACTGGAATCCATGCGAGGAGAAATGGAGTTCGTGGCGGAATTGGCTACAATGTCTCGCATCAAGCATGAAAATCTAGTTAGTCTTCGAGGGTGTTGTGTGGAAGAAGCACGAAGATATTTAGTCTTCGACTTCATGGAAAACAATAGCCTGTCCCGCACCTTTTTAGGTACCTTTTTGGTTTCGTACGTGTGGGCAGCTTATAGAGCAAACGAGCTAGTAAAAATGGTGGACCCTGTGATTACAAATATCAACTTGGTAGCAGAAGAAGCCATTCGATTCCTGAAAGTGGGGCTGCTTTGCGTGCAAGAAACCGCTAAGCTTCGGCCAAGAATGACAGAGGCCGTTGAAATGCTGAGTAGTTGCAATAATACTAATAACATGGAAGGTGTTGTAGTTTCAAAACCAGGCTTTGTTGCTGATCTCAGGAACATCAAAATAAGGCAGCAAATACCTGTACTAAGTCCCGAATCTAGTTCAAGTGGAGCAAGCCAGGGCATTTGGAGTTCGGTCATTGTCGCCCGTTAA 765 0.4562 MKIPHSFLACFSATVKEPRQIDDPEGGSSEALRVFSRIELKLATRGFNSWDKIGEGGFGSVYKGQLRDGKIVAVKVLSIELESMRGEMEFVAELATMSRIKHENLVSLRGCCVEEARRYLVFDFMENNSLSRTFLGTFLVSYVWAAYRANELVKMVDPVITNINLVAEEAIRFLKVGLLCVQETAKLRPRMTEAVEMLSSCNNTNNMEGVVVSKPGFVADLRNIKIRQQIPVLSPESSSSGASQGIWSSVIVAR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1062 254 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 138 231 - -
Lele08g1062 254 Gene3D Phosphorylase Kinase; domain 1 19 121 - -
Lele08g1062 254 Gene3D Transferase(Phosphotransferase) domain 1 122 214 - -
Lele08g1062 254 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Lele08g1062 254 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 23 124 - -
Lele08g1062 254 Pfam Protein kinase domain 50 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1062 254 ProSiteProfiles Protein kinase domain profile. 47 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1062 254 SUPERFAMILY Protein kinase-like (PK-like) 30 140 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1062 Lele-ChrLele08 6744760 6746330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1062 35 136 Receptor kinase-like Gene Family AT1G53420 51.961 6.19e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele08g1062 Pkinase 8.3e-16 CL0016