Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1060 ATGGCCAAAGACCACGAGGGAGGCGCTCCTCACCCTCACAAGGACTACCATGACCCCCCTCCCGCTCCTCTCTTCGACGCCACGGAGCTCCGCAAGTGGTATAAGGGTGGAGTGAACATGTTGTCTTCTGGCTACAGCAAAGGCACCGGTTTGGGTGCTGAGATTATTGGTACCTTCGTCCTCGTCTACACCGTCTTCTCCGCCACCGATCCCAAGAGAAATGCCAGAGACTCTCACGTTCCCGTGTTGGCTCCTCTTCCAATTGGATTCGCGGTGTTCATGGTTCACCTGGCCACCATCCCCATCACCGGCACAGGCATCAACCCGGCCAGGAGCTTTGGGGCCGCGGTCATGTACAACAATCAGACGGCATGGGATGACCACGTATGTTGAGCGGCTCCAATTTGTAATTTTCACTGGGGGCGGGAGCAGAATCAGCTTCATCTGCGGGGACAGCCGAAGAGGATGGATGAGGCTGAAGCTGAAGTGAGTTGCAAATGCATGGCGGATCGCAATTTGTATATCCTCTCATATCATGATATTATCGTAATTAACGAGTGAGAGAGAGAAAATTACTGTAGTCATGTTGAAATCACGTGTATTGGTGATGATGTTGAGCTCTTTTTTTGGGGTCAAGGTGCAATTCAACAGTTGTTGGCTGCAGAGCAAGAGGCCCAGCAGATTGTGAATGCAGCTAAAAATGAAAAACTGGCTAGACTGAAGCAGGCTAAGGAAGAGGCCGAAAAGGAGATTTCTCAATATCGAGCTCAGGTGGAGTATGATTTCCAAAGGAAATTGGAAGAGAGTAGTGGAGATTCTGGGGCCAATGTGAAGCGGCTTGCGCAAGAGACTGAGTCAAAGATCAGTCACCTCAAGACAGAGGCTGAGAGAATATCTCAGGATGTTGTTTCTATGTTCCTCAAGCATGTAACTACAGTGAGAAATTAA 948 0.4979 MAKDHEGGAPHPHKDYHDPPPAPLFDATELRKWYKGGVNMLSSGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVMYNNQTAWDDHVCXAAPICNFHWGREQNQLHLRGQPKRMDEAEAEVSCKCMADRNLYILSYHDIIVINEXERENYCSHVEITCIGDDVELFFWGQGAIQQLLAAEQEAQQIVNAAKNEKLARLKQAKEEAEKEISQYRAQVEYDFQRKLEESSGDSGANVKRLAQETESKISHLKTEAERISQDVVSMFLKHVTTVRN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1060 315 Coils Coil 215 257 - -
Lele08g1060 315 MobiDBLite consensus disorder prediction 1 23 - -
Lele08g1060 315 Pfam Major intrinsic protein 34 129 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele08g1060 315 MobiDBLite consensus disorder prediction 1 20 - -
Lele08g1060 315 SUPERFAMILY Aquaporin-like 31 136 IPR023271 -
Lele08g1060 315 Coils Coil 281 301 - -
Lele08g1060 315 FunFam V-type proton ATPase subunit G 210 315 - -
Lele08g1060 315 Pfam Vacuolar (H+)-ATPase G subunit 212 313 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lele08g1060 315 Gene3D Glycerol uptake facilitator protein. 24 137 IPR023271 -
Lele08g1060 315 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 214 314 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lele08g1060 315 Gene3D - 210 315 - -
Lele08g1060 315 PRINTS Major intrinsic protein family signature 89 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele08g1060 315 PRINTS Major intrinsic protein family signature 53 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele08g1060 315 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 34 151 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1060 Lele-ChrLele08 6730146 6734222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1060 34 128 Major Intrinsic Protein MIP AT5G60660 89.474 2.28e-55 180
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1210 05 7597169 7601717 Lele08g1060 08 6730146 6734222 hybridization