Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1052 ATGCATCGAGACGTAAGACGTTTCCTCTGTTTCCTGGTTTCGTCTCACTTGTCTTGCCTAAGTCCTTGTCAGCACTTAATGTTCTCAAGTCAAGTGATAAGTCTCGAAGGCAAATCTGATATGAAGCAGAGTTCTCATGCCCTGAGCTTGACGTTTCAGGATAATCTTGAGAAAGATATATTGATGGATAGCATAGAAAGTCCCATGTCGAGGAAGCCAGATTACAAGATGAATGCGAGAAACATGTTGATGCAGAGAAAGAAACTTTCAAGGGTGTTTTCTGAGGATTATGATGCGTCGAAAAGGAAGATATTCGATCCAAGGGGACCGACAGTAAACAGATGGAACAAGATGTTCTTAGTAGCATGTTTGATTTCACTATTTGTGGATCCCTTCTTCTTCTACTTGCAAGAGGCTAAGAAAGACAAGTGCATTGCTATATCTGCTGGACTCGGAGTTTCCCTCACCACAATTCGGTCCATGATTGATGCATTTTACATCATTCATATATTTATTCGGTTTCAAACTGCTTATGTTGCTCCTTCCTCTCGTGTTTTTGCTAGAGGAGAGTTAGTTATAGACCCTTCAAAGATTGCATCAAGCTGTAATTCCAAATCTAAGGGGGTCACAAATGATGGCTTCAAGGCAGAGTCTGCGCCTTGTGATCATTGTCCAGTACCTATTGAGGTCTTAGGATCCTCCTGGTACCTGTTGGCAATCGAAAGGCAGGGTGAATGTTGGAAAAAAGCTTGTAATCTTGAGTTCCCATATTGTCAATACCGTTATCTTGATTGTCAAAGTATAAGTGATCCAGCTAGAGCAGCTTGGTTTAGATCAAGCAACCTGTCAACTTTATGTGATAAGAACAGTGATTTCTTTCAGTTTGGTATTTTTGCCGATGCTCTCACTTTGGAAATGGCAAACTCAAAGTTCTCAAGCCGATATTATTATTGCCTGTGGTGGGGCCTGCGGAATCTCAGCTCTCTGGGACAGAATCTCCTAACCAGCACTAACGTTGGAGAGATAAATTTTGCGATCATTATTGCAATTCTTGGCTTGGTGCTTTTTGCACTTCTGATAGGAAATATGCAAACGTACCTGCAATCAACTACTTTAAGACTGGAAGAGTGGAGAATAAGACGCACAGATACAGAACGATGGATGCATCATAGGCAGTTACCTCATTACTTGAAGCAAAGTGTGAGACGCTATGAGCAATTCAGATGGGTTGCCACGAGAGGAGTTGACGAGGAATCCATCCTTCGAGACCTCCCTGTCGATATCAGACGCGACATCAAACGCCACCTGTGTCTAAACCTCGTCCGACAAGTACCGCTGTTTGATCAGATGGACGAGAGGGTGCTAGATGCAATATGTGAAAGACTGAAACCTTGTCTATGTGTTCAAGGAACGCTCCTAGTTCGCGAAGGAGATCCCGTGGCTAAAATGCGCTTTATCATTCGAGGACGTCTAGATTCTTATACCACAAATGGTGGCAGAACCGGGTTCTTCAATTGTTGTAGAATCGGACCGGGTGATTTCTGTGGCGAGGAGCTATTGCCATGGGCTCTGGACCCATGTGCAAGCGCAGTCCTTCCTTCATCAACTCGCACAGTGGAAGCCCTAACAGAAGTGGAAGCTTTCGCGCTCGTAGACGAAGACTTGAAATTTGTGGCGGCTCAGTTCAGGAGGCTACACAGCAAGCAACTGAGGCACACGTTCAGGTTTCACTCGCATCAATGGAGGGCATGGGCTGCTTGCTTCATACAAGCGGCTTGGTTTAGATATAAGAGAATAAAGGAGGCGAGTGAGCTAAATCATAAGGAGGATGCTAGGGAAAAAATGGTGGAACATTTCTCTGCGCCGTTGTACTTGCAACCTCGAATAGGTTCGGGTGTTACGATGTATAAAGCGGCCAACTTGGGATGTAGCCCGAGGAAAGGTGGAAGCTTGCGATATGGTTCTGAACTACATATTCTTGGTTCCCTCCCCAGGAAGCCCCTTGAACCTGATTTCAGTACTGTTGAAGATTGA 2034 0.4464 MHRDVRRFLCFLVSSHLSCLSPCQHLMFSSQVISLEGKSDMKQSSHALSLTFQDNLEKDILMDSIESPMSRKPDYKMNARNMLMQRKKLSRVFSEDYDASKRKIFDPRGPTVNRWNKMFLVACLISLFVDPFFFYLQEAKKDKCIAISAGLGVSLTTIRSMIDAFYIIHIFIRFQTAYVAPSSRVFARGELVIDPSKIASSCNSKSKGVTNDGFKAESAPCDHCPVPIEVLGSSWYLLAIERQGECWKKACNLEFPYCQYRYLDCQSISDPARAAWFRSSNLSTLCDKNSDFFQFGIFADALTLEMANSKFSSRYYYCLWWGLRNLSSLGQNLLTSTNVGEINFAIIIAILGLVLFALLIGNMQTYLQSTTLRLEEWRIRRTDTERWMHHRQLPHYLKQSVRRYEQFRWVATRGVDEESILRDLPVDIRRDIKRHLCLNLVRQVPLFDQMDERVLDAICERLKPCLCVQGTLLVREGDPVAKMRFIIRGRLDSYTTNGGRTGFFNCCRIGPGDFCGEELLPWALDPCASAVLPSSTRTVEALTEVEAFALVDEDLKFVAAQFRRLHSKQLRHTFRFHSHQWRAWAACFIQAAWFRYKRIKEASELNHKEDAREKMVEHFSAPLYLQPRIGSGVTMYKAANLGCSPRKGGSLRYGSELHILGSLPRKPLEPDFSTVED 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1052 677 Pfam Ion transport protein 230 373 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele08g1052 677 ProSiteProfiles cAMP/cGMP binding motif profile. 446 531 IPR000595 -
Lele08g1052 677 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 230 627 - -
Lele08g1052 677 SUPERFAMILY Voltage-gated potassium channels 106 194 - -
Lele08g1052 677 SUPERFAMILY Voltage-gated potassium channels 119 409 - -
Lele08g1052 677 CDD CAP_ED 446 577 IPR000595 -
Lele08g1052 677 Gene3D Jelly Rolls 444 564 IPR014710 -
Lele08g1052 677 FunFam Cyclic nucleotide-gated ion channel 1 444 562 - -
Lele08g1052 677 Gene3D Helix hairpin bin 374 437 - -
Lele08g1052 677 SUPERFAMILY cAMP-binding domain-like 376 567 IPR018490 -
Lele08g1052 677 SMART cnmp_10 446 577 IPR000595 -
Lele08g1052 677 FunFam Cyclic nucleotide-gated ion channel 1 373 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1052 Lele-ChrLele08 6678965 6682896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1052 77 674 Ion Channels AT2G28260 54.628 0.0 700