Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1047 ATGACCAAGAAATCCCATCCTTTATCCCCAAGATTTCCTCTCTTCTTCAACCTCTTACCTCCTTCTCCATCGCTCAATTTGATCTATATTAATTATTCCTCATTCTTCTTCCACTACCACTATATCATTATTATCATGGAGTCCATCGCCAAGGCCAACGGCCACCATCAGAATGGATCCTTCTGCCTGAGCAATGGCACCGCTGACCCGCTGAACTGGGGCGTCGCCGCCGAGTCCCTCAAGGGAAGCCACTTGGACGAGGTGAAGCGCATGGTGGAGGAGTACCGGAAGCCGGTGGTCAGGCTTGGCGGCGAGACCCTCACCATCTCTCAGGTGGCTGCCATTGCCTCTCATGACCAGGGCGTGAAGGTGGAGCTTTCGGAGTCGGCCAGGGCCGGCGTTAAGGCCAGCAGTGACTGGGTCATGGACAGCATGAACAAGGGAACTGATAGCTACGGGGTAACCACCGGATTCGGGGCTACCTCTCACCGCAGAACAAAGCAAGGCGCTGCTCTGCAGCAAGAGCTCATCAGATTCTTGAACGCCGGAATATTCGGCAATGGCACAGAGTCTTGCCAAACTCTGCCACACTCCGCCACAAGAGCCGCCATGCTTGTCAGAATCAACACTCTCCTCCAAGGATACTCTGGCATCCGATTTGAAATCCTAGAAGCCATCACCAAGTTCCTCAACCACAACATCACCCCATGCTTGCCACTTCGTGGTACCATCACAGCCTCCGGCGATCTCGTCCCTCTGTCTTACATCGCCGGTTTACTGACCGGAAGACACAACTCCAAAGCCGTTGGACCCAACGGAGAAGCCCTTAATCCTAAGGAAGCTTTTCAATTGGCAGGCATCGAGTCCGAGTTCTTCGAATTGCAGCCCAAGGAAGGGCTTGCTCTTGTAAATGGTACAGCCGTTGGTTCTGGCTTGGCTTCCATGGTTCTCTTTGAGGCTAACATTCTCACCGTGCTCGCTGAAGTTCTTTCTGCCATTTTCTCTGAAGTCATGCAAGGGAAGCCTGAATTTACAGACCATTTGACCCACAAATTGAAGCACCACCCCGGCCAGATTGAAGCCGCTGCGATCATGGAACACATTTTGGATGGAAGCTCCTATGTTAAAGCAGCCAAGAAGTTGCACGACATGGATCCTCTGCAGAAACCTAAACAAGATCGCTATGCCCTTCGAACTTCACCACAATGGCTTGGCCCTCTCGTTGAAGTTATCAGATTCTCCACAAAATCAATTGAGAGAGAGATCAACTCTGTGAACGACAACCCCTTGATTGACGTTTCAAGGAACAAGGCTCTGCACGGTGGTAACTTCCAGGGTACCCCAATTGGTGTCTCCATGGACAACACTCGTCTGGCTATTGCCTCCATCGGAAAACTCATGTTTGCTCAGTTCTCTGAGCTCGTCAATGACTTCTACAACAATGGCTTACCTTCCAATCTCACTGCCAGTAGAAACCCTAGCTTGGATTATGGTTTCAAGGGAGCTGAAATCGCCATGGCTTCTTACTGCTCTGAACTTCAATATCTTGCCAATCCCGTGACAAGCCACGTCCAAAGTGCAGAGCAACACAACCAAGATGTGAACTCTCTGGGTTTGATCTCGTCTAGGAAAACAAACGAAGCCATTGAGATCTTGAAGCTCATGTCTTCCACATTTTTGGTTGCTCTCTGCCAAGCAATTGACTTGAGGCACTTGGAAGAGAACTTGAAGAACACAGTGAAGAACACCGTTAGCCAAGTTGCCAAGAGAACTCTGACCACAGGAGTGAATGGAGAACTCCATCCTTCAAGATTCTGCGAGAAGGATTTACTGAAAGTTGTAGACAGAGAGTACGTGTTTGCCTACGCTGATGATCCCTGCAGTGCTCTTTACCCATTGATGCAGAAACTCAGGCAAGTTCTCGTGGACCATGCCCTGGCCAATGCCGAAAAAGAGAAGAACACAAGCACATCAATCTTCCAAAAGATTGGAACTTTCGAGGAGGAATTGAAGAATGTGTTGCCGAAGGAAGTTGAGAGTGCAAGAGTTGCATATGAGAACGGCAATTCTGAGATTCCAAATAGGATCAAGGAATGCAGATCATATCCTCTGTACAAGTTTGTGAGAGAGGAGCTGGGAACTCAGTTGCTGACCGGCGAGAGTGTGATTTCACCGGGCGAGGAGTGTGACAAGGTGTTCACAGCTTTATGTCAGGGCAAGATCATTGATCCTCTTCTGGAATGTGTTGGCCAGTGGAATGGAGCCCCTCTTCCAATCTGTTAA 2283 0.4954 MTKKSHPLSPRFPLFFNLLPPSPSLNLIYINYSSFFFHYHYIIIIMESIAKANGHHQNGSFCLSNGTADPLNWGVAAESLKGSHLDEVKRMVEEYRKPVVRLGGETLTISQVAAIASHDQGVKVELSESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGAALQQELIRFLNAGIFGNGTESCQTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRHNSKAVGPNGEALNPKEAFQLAGIESEFFELQPKEGLALVNGTAVGSGLASMVLFEANILTVLAEVLSAIFSEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHDMDPLQKPKQDRYALRTSPQWLGPLVEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYADDPCSALYPLMQKLRQVLVDHALANAEKEKNTSTSIFQKIGTFEEELKNVLPKEVESARVAYENGNSEIPNRIKECRSYPLYKFVREELGTQLLTGESVISPGEECDKVFTALCQGKIIDPLLECVGQWNGAPLPIC 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1047 760 SUPERFAMILY L-aspartase-like 69 760 IPR008948 GO:0003824
Lele08g1047 760 PANTHER HISTIDINE AMMONIA-LYASE 59 760 IPR001106 -
Lele08g1047 760 Gene3D Fumarase/aspartase (Central domain) 307 755 - -
Lele08g1047 760 Gene3D - 62 306 IPR024083 -
Lele08g1047 760 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 242 258 IPR022313 GO:0016841
Lele08g1047 760 Gene3D - 573 694 IPR023144 -
Lele08g1047 760 CDD PAL-HAL 105 570 IPR001106 -
Lele08g1047 760 FunFam Phenylalanine ammonia-lyase 307 613 - -
Lele08g1047 760 FunFam Phenylalanine ammonia-lyase 62 306 - -
Lele08g1047 760 Pfam Aromatic amino acid lyase 107 583 IPR001106 -
Lele08g1047 760 FunFam Phenylalanine ammonia-lyase 573 694 - -
Lele08g1047 760 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 69 749 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1047 Lele-ChrLele08 6643679 6647861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1047 69 760 Monolignol Biosynthesis Gene Families AT2G37040 85.694 0.0 1258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1242 07 7521058 7525026 Lele08g1047 08 6643679 6647861 ECH
Lele05g1196 05 7502607 7506049 Lele08g1047 08 6643679 6647861 ECH
Lele06g1065 06 6613709 6617826 Lele08g1047 08 6643679 6647861 ECH
Lele08g1047 08 6643679 6647861 Lele05g1196 05 7502607 7506049 ECH
Lele08g1047 08 6643679 6647861 Lele06g1065 06 6613709 6617826 ECH
Lele08g1047 08 6643679 6647861 Lele07g1242 07 7521058 7525026 ECH
Lele08g1047 08 6643679 6647861 Lele08g1047 08 6643679 6647861 ECH
Lele05g1196 05 7502607 7506049 Lele08g1047 08 6643679 6647861 hybridization
Lele06g1065 06 6613709 6617826 Lele08g1047 08 6643679 6647861 hybridization