Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1042 ATGGCCGTTAACATTAGCCGTTTTCACATCAAAGCCTCTTCATTTCACCCTCCATTTCCCTCTATCTTTCCGTTTCGTGTCACTCTTTCGCGGTTCGAGGCTTTTCAGGTTCGAACATTCGCTCAAATTTCTCTGACACCCTTTTCCTCCTCCTCATTATCTCACTCTCGCCCTTCCTCTCTCGCGTTCTTGCCCTCTCACTCTCCTCAAGGATGCGCAAGAGAACGTGAGATGGATCCAGAAGAATACTTGCAGAAGTGTTCCAATATGAAATGCCAAAGGGTTCAAGTAGATGGATCACTTGTTCCTGCCATTCAAGACGAATCAATGGAAGTTGAACATTTGCTTGCTGAACCTAGGAATGATCATGTTTCAGTGGATGGCATTTTGTATTTTCATGAGGAGAATGCGGGCCAATGCTGTGCTGTTGAAAATCTTTCCCGTGGATTTGAATTTGGTCTTAGAACAAGCATAGGTGGATCAGATTCTCACACAACTTTGAATGGAAAAGATGATTTGAAACTTGAGGTACTTGATGGGTTGCTGGATGACGTTGAAATTGATGGTCTTAATGCGACAGATGGGTTTTCATGCGAAGATTATCTTTTGGATTTTGAATTTGCTGACAAAGCTGTGGGTCCTTGGGGAGAATCACTATTGCAAAGTTCAAGCTCTGAGAGTCATTCTCCAGGATTAAGTGGAAGCAGCAATGGTATTGGCGGGGTATCTGAATCATTGAAAGTGGCCATCGAACAATCTGAATACAAAAATGATTTTCTAGATAATATAGTAACTCACGACTTACATGGTGCCTTCGGGAACAATTCCTGTCAAACATCAATTGAAGATGGCATTTGCAATTCACTTGATGTGCAGCATCTAAATGAGTTGGATAATGATCCCCCTTTAGCAGATACTGTATTGTCTTGCAAGAAGGAAAAGGGTTCTGCAGATGAATGCCAAACTGCTGCAGTTAGAGAGACGAGATGCCGTAAGCCTACTCTGAGGTATATCGAAGAATTTTCAAATTTAAGGTCAAAAGAAAAGGCTTTGAATTCTGCAACCAAAAATAAACCCTCGAGTTTGGCATCACATCACAAACTTCGTCATATAAGGTTTAGAGCATTGAGACACATTCCAGACAAGAATTCTGATGGTCAAACAAGTGATATGGCACTTCCTGAGTTGCAGGGGCACAAGCGATTCCTGAAAAATGAGGAACTTGAATATGATGAAGAGTCTAATGCATCTGAGTCCGAGGATGAATGCTCGACCCCAAAAAGACAGAGAAAAAAAGATCGGAGGAAGCATCAAAGAATGTGGACTTTATCTGAAGTGATCAAGTTGGTTGACGGCATTTCTGAATATGGAATTGGTCGATGGACTGATATAAAACGTGTTCTGTTTTCTTCCTCCAGTTACCGTACACCGATTGATCTTAGGGACAAGTGGCGGAATCTTTTAAGAGCCAGTTCAGCGCAGAAATTTAACAGCAAAGAGACTGAACAAAAGAATCAGCACACCTTGCGTTCCTTACCGAGTGCTGTTCTTCGCCGTGTCCATGAACTGGCTAAAATTCACCCATACCCGAGGGAGCGTTATTCGAAGGAATCATCTGCTGGCCAAGTTGGCTCCTCAATTCTTGCAACTCGGACAAAAGGTGGTCCTAGCAAAAGAAATGTTCGTAGGAAGAAATGTATTTGA 1704 0.4237 MAVNISRFHIKASSFHPPFPSIFPFRVTLSRFEAFQVRTFAQISLTPFSSSSLSHSRPSSLAFLPSHSPQGCAREREMDPEEYLQKCSNMKCQRVQVDGSLVPAIQDESMEVEHLLAEPRNDHVSVDGILYFHEENAGQCCAVENLSRGFEFGLRTSIGGSDSHTTLNGKDDLKLEVLDGLLDDVEIDGLNATDGFSCEDYLLDFEFADKAVGPWGESLLQSSSSESHSPGLSGSSNGIGGVSESLKVAIEQSEYKNDFLDNIVTHDLHGAFGNNSCQTSIEDGICNSLDVQHLNELDNDPPLADTVLSCKKEKGSADECQTAAVRETRCRKPTLRYIEEFSNLRSKEKALNSATKNKPSSLASHHKLRHIRFRALRHIPDKNSDGQTSDMALPELQGHKRFLKNEELEYDEESNASESEDECSTPKRQRKKDRRKHQRMWTLSEVIKLVDGISEYGIGRWTDIKRVLFSSSSYRTPIDLRDKWRNLLRASSAQKFNSKETEQKNQHTLRSLPSAVLRRVHELAKIHPYPRERYSKESSAGQVGSSILATRTKGGPSKRNVRRKKCI 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1042 567 ProSiteProfiles Myb-like domain profile. 433 488 IPR001005 -
Lele08g1042 567 MobiDBLite consensus disorder prediction 409 437 - -
Lele08g1042 567 MobiDBLite consensus disorder prediction 219 238 - -
Lele08g1042 567 SUPERFAMILY Homeodomain-like 435 490 IPR009057 -
Lele08g1042 567 SMART sant 437 490 IPR001005 -
Lele08g1042 567 MobiDBLite consensus disorder prediction 532 567 - -
Lele08g1042 567 Pfam Myb-like DNA-binding domain 441 488 IPR001005 -
Lele08g1042 567 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 433 492 IPR017930 -
Lele08g1042 567 Gene3D - 427 539 - -
Lele08g1042 567 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 81 545 - -
Lele08g1042 567 MobiDBLite consensus disorder prediction 538 553 - -
Lele08g1042 567 CDD SANT_TRF 439 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1042 Lele-ChrLele08 6618196 6623833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1042 439 488 Single Myb Histone (SMH) Gene Family AT1G15720 46.000 8.04e-06 46.6