Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1041 ATGATTTGCACAACGAGACGAGTTAATCGAGATTATCTATCACTTACTGGAGATCAAGCCGTTGCAATGAAGTGTTTTCCATTCCACTACGGAGAGAAGAAGGAAGAACCACCGATGAGCGTGAAGTCAGCCTCGGGTCGTTCCAACAGTTCCACAAATGCCGAGGATGATGTGAGAAGATCTGTTTCTGAATTGAATTCCAAGGATCAGTCAGAAAACAGTGCAGAGCCCCTTAGGAGGACTGCGTTACCCAGTTTGTCTCAAAGACCCAGCAACCTGAAAGTTTTCACTGTTCCCGAACTAAAATCAGCCACAAAGAATTTCAGTCGCTCTGTTTTGCTTGGAGAGGGAGGGTTTGGATGTGTATACAAGGGATTCATCAAGAGTGGAGAGGATCCTAACAGAAAACTTGAAGTTGCAGTTAAACAACTTGGTAAAAGAGGTGTGCAGGGCCATAAGGAATGGGTGACAGAAGTTAATGTTCTGGGCATTGTTGAGCATCCCAATCTGGTAAAACTAGTGGGTTACTGTGCGGATGATGATGAAAGAGGAATCCAGCGGCTTCTGATTTATGAATATATGCCCAACAGAAGTGTGGAACACCATTTATCAACCCGTTCAGAGAATCCTCTCTCATGGAGTAGAAGACTGAAAATAGCTGAAGACGCAGCTCGTGGCTTAACATACCTGCACGAGGAAATGGATTTTCAGATAATCTTCAGAGACTTCAAATCTTCAAACATCCTCCTGGATGAGCATTGGAATGCAAAGCTATCAGACTTTGGGTTAGCTAGATTGGGACCACCTGAAGGATTAACTCATGTCTCAACAGCGGTTGTGGGAACAATGGGATATGCGGCTCCTGAATATGTTCAAACTGGCCGTCTGACATCCAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAACTCATCACTGGCCGGCGCCCTTTTGATCGAAATCGTCCAAAGGGTGAGCAGAAGCTCTTGGAATGGGTGAGGCCATACTTATCAGATGGGAAGAAATTTCAACTAATATTGGATCCAAGGCTTGAAAGGAAGCACTTTTTTAAGTCAGCTCAAAGACTCGCTATTGTAGCTAACCGATGTTTAGTAAAAAACCCAAAGAATCGCCCTAAGATGAGTGAGGTATTGGATATGGTGAATCAGATTGCACAATCTTCATTGAGTGCAAGTCCAGAGCTACCCCTGAAGAATTTCGCATCCGCGCAAGAAACCAAATTAAAGAACAAGAGAAGGAATATGGACCTGAAACCTGGAGAAACTAATTGGTTTTTTAGGATATGGAGACCAAAACATCAGAGAGCTAGTTGA 1338 0.4372 MICTTRRVNRDYLSLTGDQAVAMKCFPFHYGEKKEEPPMSVKSASGRSNSSTNAEDDVRRSVSELNSKDQSENSAEPLRRTALPSLSQRPSNLKVFTVPELKSATKNFSRSVLLGEGGFGCVYKGFIKSGEDPNRKLEVAVKQLGKRGVQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSTRSENPLSWSRRLKIAEDAARGLTYLHEEMDFQIIFRDFKSSNILLDEHWNAKLSDFGLARLGPPEGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPFDRNRPKGEQKLLEWVRPYLSDGKKFQLILDPRLERKHFFKSAQRLAIVANRCLVKNPKNRPKMSEVLDMVNQIAQSSLSASPELPLKNFASAQETKLKNKRRNMDLKPGETNWFFRIWRPKHQRAS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1041 445 FunFam Serine/threonine-protein kinase BIK1 76 193 - -
Lele08g1041 445 Gene3D Transferase(Phosphotransferase) domain 1 194 406 - -
Lele08g1041 445 ProSiteProfiles Protein kinase domain profile. 108 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1041 445 Gene3D Phosphorylase Kinase; domain 1 82 193 - -
Lele08g1041 445 Pfam Protein kinase domain 110 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1041 445 CDD STKc_IRAK 114 392 - -
Lele08g1041 445 MobiDBLite consensus disorder prediction 34 84 - -
Lele08g1041 445 SUPERFAMILY Protein kinase-like (PK-like) 84 389 IPR011009 -
Lele08g1041 445 PANTHER OS01G0588500 PROTEIN-RELATED 66 392 - -
Lele08g1041 445 MobiDBLite consensus disorder prediction 67 84 - -
Lele08g1041 445 ProSitePatterns Protein kinases ATP-binding region signature. 114 142 IPR017441 GO:0005524
Lele08g1041 445 FunFam Serine/threonine-protein kinase PCRK2 194 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1041 Lele-ChrLele08 6612428 6616126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1041 23 386 Glycoside Hydrolase AT3G07070 45.187 1.58e-93 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele08g1041 Pkinase 8.3e-48 CL0016