Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1028 ATGATTGCAGTCTTATCATCCATCAGAGCCATTCCCAAGAACTTACCAGTTCCAGAGATGGGTCGAGCTCCTTGCTGCGACAAGGCCAATGTAAAGAAGGGACCATGGTCTCCTGAAGAAGATACACAGCTAAAGGAGTACATAGAGAAACATGGAAGTGGAGGCAATTGGATTGCTCTCCCTCAAAAAGCTGGTCTAAAAAGATGTGGGAAAAGCTGCAGACTAAGATGGCTCAACTATCTCCGGCCTAACATCAAACACGGAGAGTTCTCCGAACATGAAGATAGGATCATCTGTAGCCTCTTTGCTAGCATCGGAAGCAGGTGGTCAGTGATAGCATCTCAGCTGCCTGGAAGGACTGATAACGATATTAAGAACTACTGGAACACCAAGCTTAAGAAGAAGATGATGACCATGAATAATCCTTCTTCAGCTCATCATCATCACTACCAAGCCACCCTTTTACCCGTTCTCCAAAATTCAACTCCATCTTCATCCTCATCGTCAGCATCTTCACCATTATCATTCACAGACAGCACCAACTCTTACTGCCACCCTCCTTATGCTTCTTCATTCTCATCTGCTGATCAATCCATTTCCTTCTCGTCGTCGGTGAATTTCTTGTACGGCGGCCATTCCTCTTGTGCTTCTGCAGCTGCTGTCTCTTTCTATCAACCCCAAGAAAGCTTCATGGGTCCCATGGATCAGCTAGTTAGTTGTAGTTCTTCAAATGGGAGCTGTAATAATAGCAGCCAGATGAGTCATGTGAAAGAAAATGGAGCTGCTGGATATGTAGTAGATTATCAAGGAACTATGCTGGAACAGATGATAGCTGCCAACAATAATATAAACTATGATTATGTGCAGAATATCATTGGGATGGAAATGGAAGAAAGTGAGGTGATGGTGTGTGATGGGGACTACGTGAATGGTTGGACGGGGAAACAAAATGGAGTGTGGGAAGAGAATCCGCCCTTAGATTATGGGATAGAAGAAATTAAGCAGTATGGATGCTTGAAGTTTTCAAAGAAAAACACCACACAAGAAAGTCATGTTCTATCGAATTGATTTTTCCAATTGCTTTTTGGGATTTCACATTTGTGTCCACCCGAGGAGGGTGGAGAATTCAAAGGGGTTGGACTTTTGGATTAG 1152 0.4358 MIAVLSSIRAIPKNLPVPEMGRAPCCDKANVKKGPWSPEEDTQLKEYIEKHGSGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGEFSEHEDRIICSLFASIGSRWSVIASQLPGRTDNDIKNYWNTKLKKKMMTMNNPSSAHHHHYQATLLPVLQNSTPSSSSSSASSPLSFTDSTNSYCHPPYASSFSSADQSISFSSSVNFLYGGHSSCASAAAVSFYQPQESFMGPMDQLVSCSSSNGSCNNSSQMSHVKENGAAGYVVDYQGTMLEQMIAANNNINYDYVQNIIGMEMEESEVMVCDGDYVNGWTGKQNGVWEENPPLDYGIEEIKQYGCLKFSKKNTTQESHVLSNXFFQLLFGISHLCPPEEGGEFKGVGLLD 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1028 383 FunFam Transcription factor RAX2 89 154 - -
Lele08g1028 383 FunFam Transcription factor RAX3 26 87 - -
Lele08g1028 383 PANTHER OS09G0431300 PROTEIN 20 279 - -
Lele08g1028 383 ProSiteProfiles Myb-like domain profile. 82 132 IPR001005 -
Lele08g1028 383 SUPERFAMILY Homeodomain-like 30 128 IPR009057 -
Lele08g1028 383 CDD SANT 35 81 IPR001005 -
Lele08g1028 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 136 IPR017930 -
Lele08g1028 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 85 IPR017930 -
Lele08g1028 383 SMART sant 86 134 IPR001005 -
Lele08g1028 383 SMART sant 32 83 IPR001005 -
Lele08g1028 383 ProSiteProfiles Myb-like domain profile. 28 81 IPR001005 -
Lele08g1028 383 Gene3D - 26 87 - -
Lele08g1028 383 CDD SANT 89 132 IPR001005 -
Lele08g1028 383 Gene3D - 89 154 - -
Lele08g1028 383 Pfam Myb-like DNA-binding domain 33 81 IPR001005 -
Lele08g1028 383 Pfam Myb-like DNA-binding domain 88 130 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1028 Lele-ChrLele08 6524201 6527729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1028 20 137 MYB Transcription Factor Family AT5G57620 86.441 5.03e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele08g1028 Myb_DNA-binding 8.1e-15 CL0123