Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1017 ATGAAAGGTGAGATGTTGCGTAAAGGGCCTTGGCTCCAAGAAGAAGACGAGCAACTTACCACCTTTGTTACTTGTCTGGGAGAACGAAGATGGGATTCACTTGCCAAAGTAGCTGGACTCAGGAGAAGTGGGAAGAGTTGCAGGTTGAGGTGGATGAACTATCTTCGTCCAAATCTGAAGCATGGCCCTTTTAGTGTTGAAGAAGAGCAACTCATTATTCAACTTCACCAGCAATGGGGTAACAAATGGTCAAAGATTGCCCGCAGTCTACATGGAAGAACCGACAATGAAGTCAAGAATTATTGGAGAACTCATTTCAGAAAGAAAGCACGACTTGAACAACAAGATAAGTTCCAATATAAACCAGACAACACTGAACAAGGTGCCTTCAGCGAGGAAAACAATAATGATAACGCTTGCGAGGATTACAACCAAATGAAGCTTGAATGGCGAGGAAATGTTGGAGAGACTAAGGATAATTCCTCTCAAGCTTTTCCACCATCAGAATGGGAAATGACAAGTTCACCGTACGAGATTCGAGTATCAGATTGGATAGCAGAACTGCAAAAAGATCAGAATGAAATGGAATATGAACATCATTGTAATACCACACAGTCCACTGAATCTTATTCTGCATGGTTTGACTCTGATACGTGGGCTTATTCTTATTCAGGTTCCATCTGGGACATGAATTGA 696 0.4195 MKGEMLRKGPWLQEEDEQLTTFVTCLGERRWDSLAKVAGLRRSGKSCRLRWMNYLRPNLKHGPFSVEEEQLIIQLHQQWGNKWSKIARSLHGRTDNEVKNYWRTHFRKKARLEQQDKFQYKPDNTEQGAFSEENNNDNACEDYNQMKLEWRGNVGETKDNSSQAFPPSEWEMTSSPYEIRVSDWIAELQKDQNEMEYEHHCNTTQSTESYSAWFDSDTWAYSYSGSIWDMN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1017 231 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Lele08g1017 231 Gene3D - 63 125 - -
Lele08g1017 231 CDD SANT 10 55 IPR001005 -
Lele08g1017 231 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Lele08g1017 231 SMART sant 7 57 IPR001005 -
Lele08g1017 231 SMART sant 60 108 IPR001005 -
Lele08g1017 231 CDD SANT 63 106 IPR001005 -
Lele08g1017 231 Pfam Myb-like DNA-binding domain 62 105 IPR001005 -
Lele08g1017 231 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Lele08g1017 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Lele08g1017 231 Gene3D - 8 60 - -
Lele08g1017 231 FunFam Myb transcription factor 8 60 - -
Lele08g1017 231 SUPERFAMILY Homeodomain-like 7 102 IPR009057 -
Lele08g1017 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Lele08g1017 231 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 192 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1017 Lele-ChrLele08 6467043 6468021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1017 4 111 MYB Transcription Factor Family AT5G59780 63.889 8.15e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele08g1017 Myb_DNA-binding 1.1e-11 CL0123