Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1015 ATGCTCCAACCAAACTGCATTGTGCCATTCTTCATTCTGGTGTCTTTTTCACCACTTGGAATAGCAATGCTGAACCTCACTCTTCCTGGCCAGCATCCCGACCCCGATTCTGTCGTTCGAGAGTTTCACAGGAAAGTGAATGCTTCAATAACGAGAAGGCAGATGCTAGCAGAGTCGTCGTGTTTAACAGGGAACCCAATTGACGATTGCTGGAAATGCGACCCAGATTGGCCCAACAACAGGCAGAGGTTAGCTGAATGTGCGATTGGGTTCGGGCAGTACGCAAAGGGAGGCCAGGGCGGCGAATTCTACATCGTCACTGACTCGTCCGACGACGACGCCGTCAACCCGAAACCTGGTACACTCAGATACGCCGTGATCCAGACGCAGCCCCTGTGGATAGTGTTCCCCAGTAATATGATGATTAAATTGTCTCAGGAGCTCATCTTCAATAGTTACAAAACTCTTGATGGCCGTGGTGCTGACGTTCACATTGTGGGCAGTGGCTGCATTACGCTCCAGTATATAAGCAATGTCATCATTCACAACATTCACATCCACCACTGTCACCCATCAGAGAATATTGTGTTGAAATTAAATGCATACTTGCCTGATCTCACTCTCAACAAATTATTGGCATCTATTCCTCATTTCTTCTCGGTGGGCCCGGGCTTGATCCTGGATTTTACCGAGTTGGAACGCTAA 705 0.4837 MLQPNCIVPFFILVSFSPLGIAMLNLTLPGQHPDPDSVVREFHRKVNASITRRQMLAESSCLTGNPIDDCWKCDPDWPNNRQRLAECAIGFGQYAKGGQGGEFYIVTDSSDDDAVNPKPGTLRYAVIQTQPLWIVFPSNMMIKLSQELIFNSYKTLDGRGADVHIVGSGCITLQYISNVIIHNIHIHHCHPSENIVLKLNAYLPDLTLNKLLASIPHFFSVGPGLILDFTELER 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1015 234 Gene3D - 64 201 IPR012334 -
Lele08g1015 234 PRINTS Pollen allergen Amb family signature 111 136 IPR018082 -
Lele08g1015 234 PRINTS Pollen allergen Amb family signature 87 104 IPR018082 -
Lele08g1015 234 PRINTS Pollen allergen Amb family signature 147 163 IPR018082 -
Lele08g1015 234 PANTHER PECTATE LYASE 18-RELATED 29 195 IPR045032 GO:0030570
Lele08g1015 234 SUPERFAMILY Pectin lyase-like 65 191 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1015 Lele-ChrLele08 6463548 6464736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1015 1 198 Polysaccharide Lyase AT3G53190 70.192 2.23e-89 270