Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0991 ATGAACAGCGACGGCAACAGCGACAACGTTGAAGGCCAAGGCCAAGTAGGCTACTTTGTGAATCCTCTCATCATCTCTGGCGCCGGCATCATCTGCTCCTGCGTCGCCTTAGCCACATACCACTTCATCCTCTTCAGGCTCTGCCTTCGAGGCCGACGACAATTGCAGCAAGTCGCTCAGCCTATAAGCCCCCCTGCCGATGACATTCCCTGTGGCGTCGACCCTGAAATCCTAAAAAAAATCCCAATTCTGCCATATTCTCACAAGAAAGATGACGCCTTTCGTTTGGACCAAACTGAATGCGCGATTTGCTTGGGCGAATTGCAGGATGGAGAAAAGGTTCGATTATTGCCTTCTTGTAGCCATGCTTTTCACATACCTTGTATCGATCTCTGGTTCGCTCAGAATTCCAATTGTCCCATTTGTCGAGCGCCGTTACTTATAGCCCCTCCGCCATCCCTGCCGGTAGCTTCAGAAACTGTTGTCGATGCTCAAGAAATAAGGGTTTGTCATCAAAGTGATCATCATAAGATCGTTGCTTCTGATCTTTTGACGAGTGCTTCTGGTTCGACGTCACGAGGAGGGCATCTTGGAGAGGCCACGCTTCAGCACTCTCTCTCTATGGCGTGTCGTCACGAACAGGAAAAGCCGATGATGATGGGGATGAAGAGGTCTCTGTCCATGGATCATTCGTCGTATGTTTCTGTCAGCATACAAAGGGACGAGGAAAATAATAAAGCTGCTGCTTCATCTTCTTCTTCGCCATCTGTCGCTGAAGGGATTGGGATTGCGCATGCTAAAGCGCTTGATCAGGTGTCGTCCATGTTGATGATGTCTTTCGCCCAGTTTCGGAACAGTAGAAACGAGAGATCCAAAGGCATTCTACCGAATTGA 894 0.4922 MNSDGNSDNVEGQGQVGYFVNPLIISGAGIICSCVALATYHFILFRLCLRGRRQLQQVAQPISPPADDIPCGVDPEILKKIPILPYSHKKDDAFRLDQTECAICLGELQDGEKVRLLPSCSHAFHIPCIDLWFAQNSNCPICRAPLLIAPPPSLPVASETVVDAQEIRVCHQSDHHKIVASDLLTSASGSTSRGGHLGEATLQHSLSMACRHEQEKPMMMGMKRSLSMDHSSYVSVSIQRDEENNKAAASSSSSPSVAEGIGIAHAKALDQVSSMLMMSFAQFRNSRNERSKGILPN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0991 297 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 147 IPR013083 -
Lele08g0991 297 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Lele08g0991 297 SMART ring_2 101 142 IPR001841 -
Lele08g0991 297 MobiDBLite consensus disorder prediction 234 256 - -
Lele08g0991 297 CDD RING-H2_PA-TM-RING 100 143 - -
Lele08g0991 297 SUPERFAMILY RING/U-box 93 149 - -
Lele08g0991 297 Pfam Ring finger domain 100 143 IPR001841 -
Lele08g0991 297 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 19 150 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0991 Lele-ChrLele08 6292052 6292945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0991 29 252 C3H Transcription Factor Family AT5G17600 26.459 3.26e-24 99.0