Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0990 ATGCAGCGTGACACTAATCAGTCAAAGCCTTCCAAAGACCAATCAACGCCATCTAACAAGCTGATCAGTGACCCTCTAAACATGATGGGAAAAGAAAGTGACGAGTGTTGGAAACTATTGACGTTGAGGATGTGGTACTTCACTCGGATCCTCCACGGGGAAATAACGGTGATTGAGAACACAATGTCGGTGCCTCCGTGGCTTGAGCCCCTACTAACCACTTCCTTCTTCAGCGTCTGCCGCTTTCACGGTGACGCCGCCAGGAGCGAGTGTAACATGTTCTGTCTCGACTGCAATCGCGACCCATTTTGCTTCTATTGCCGTTCCTCCAGACACAAGGATCATCAAGTCATTCAGATAAGGCGATCTTCGTATCACGATGTGGTGAGAGTATCTGAGATTCAGAAGGTGCTGGACATAAGCGGGGTTCAGACGTATGTGATAAACAGCGCGAGAGTGTTGTTCCTGAACGAGAGGCCTCAGCCAAAATCTGGGAAAGGAGTAGCTCATATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTCCGCTTCTGTTCTCTGGGCTGTAAGCTTGTGGGAGTGAAGAGAAATAGGGACGCAAGCTTTGCTTTGGAGGGAAACAACGAGGCAATGGAGGGAATATCAGGGAGATCAGCATCAGAAGAAGAATCGCGTGAAGGCTCGCAACAAGACATGTATCCGGCCACGCCTCCTCCACCTGCTTCAACCGCACGAAGAAGAAAAGGCATTCCACACAGGGCTCCATTTGCCTCCTAG 780 0.4987 MQRDTNQSKPSKDQSTPSNKLISDPLNMMGKESDECWKLLTLRMWYFTRILHGEITVIENTMSVPPWLEPLLTTSFFSVCRFHGDAARSECNMFCLDCNRDPFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGVKRNRDASFALEGNNEAMEGISGRSASEEESREGSQQDMYPATPPPPASTARRRKGIPHRAPFAS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0990 259 Gene3D Classic Zinc Finger 78 123 - -
Lele08g0990 259 MobiDBLite consensus disorder prediction 1 23 - -
Lele08g0990 259 SUPERFAMILY B-box zinc-binding domain 79 122 - -
Lele08g0990 259 MobiDBLite consensus disorder prediction 213 259 - -
Lele08g0990 259 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 60 257 - -
Lele08g0990 259 Pfam PLATZ transcription factor 121 192 IPR006734 -
Lele08g0990 259 MobiDBLite consensus disorder prediction 1 25 - -
Lele08g0990 259 CDD Bbox2 79 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0990 Lele-ChrLele08 6287745 6289918 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele08g0990 PLATZ 1.5e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0990 08 6287745 6289918 Lele13g1716 13 25685071 25689694 CCT
Lele08g0990 08 6287745 6289918 Lele14g1661 14 24081153 24084174 CCT
Lele08g0990 08 6287745 6289918 Lele15g0700 15 4034432 4036879 CCT
Lele08g0990 08 6287745 6289918 Lele16g0703 16 3958582 3962781 CCT
Lele08g0990 08 6287745 6289918 Lele08g0990 08 6287745 6289918 ECH
Lele06g1005 06 6233712 6235953 Lele08g0990 08 6287745 6289918 hybridization