Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0974 ATGAACAAGCCTCATGCATTAAACCTGGCTTTCGCCTTCGCCTTCACTTTGGCTTTCCTCTGTTTCACAACATCTCTCTGTTTAGCTCAGAATGACACCCAAGTGCTCACTCGGTTCCGCCTCCAGACCGACGCTCATGGTTATCTCCTCTCTAATTGGACCGGAGCCGACGCCTGCTCCGCCACTTGGCGCGGCGTCTACTGCTCCTCCAACGGCCGAGTCGTCTCCTTTTCTCTCCCTTCCCTCAATCTCCGAGGGCCTATTGACTCACTTTCATCGCTTGTGCACCTTCGCCTCCTTGACCTTCATGATAATCGTTTAAACGGCAGCATTGCGGCTCTCTCCAACTGCACCCGCCTCCGGCTCCTTTACCTCTCCCACAACGACTTCTCCGGTGAGATTCCGCAGGGAATAGCTTCTCTTAAGCATCTACTGAGGCTTGACCTTTCTGACAACAACATCCATGGTCCAATTCCCAACGAACTCTCTTCATTAACTCACCTTCTCACGCTTCGCCTACAGAACAATGTGCTCTCCGGGAAAGTTCCGGATCTCTCTGTTTCGCTTGTGAATCTCACAGAGCTCAATTTCACCAACAACGAGCTCTACGGACGCTTATCGGATGGAATGTTGAAGAAATTCGGTGACAAAACCTTCTCTGGGAATGAAGGTTTGTGTGGCTCAACCCCATTCCCGATTTGTTCCTTCACAGACAGTCCTCCTTCTTCCGCATCACCGCCGCAGATAGTTCCTTCGAACCCAAGTTCGTTGCCTGAATCTCAAACAAGCGTAATTGTCACACCCAAAACCCAACGGCGAAAGGGGTTAAGCCCCGGAGCTATAGTAGCCATAGTGGTGGCGAATTGCGTGGCATTATTGGTGGTAACCTCTTTCATCGTAGCTCACTGTTGCGCAAGAGGACGAAGCTCAAACTCGATGGTGGGTAGTGAAAATGGGAAGAGAAAAAGTGGCAGTAGTGGCTCCGGAAGCGAGAAGAAGGGGTACGTCAATAATGGGGGAGCAGATATCGATGGCACTAGCGGCACAGACCGAAGCAGGCTGGTGTTCTTCGATCGTCGGAATCAATTCGAGCTGGAGGAATTGCTCAGAGCATCGGCGGAGATGCTGGGAAAAGGCAGCTTGGGGACGGTTTATAAGGCGGTGCTTGATGACAGTTCTACCGTGGCGGTGAAGAGGCTTAAGGACGCAAATCCATGCGCCAGGAATGAGTTCGAGCAGTACATGGACATCATCGGAAAGGTCAAGCACCCCAACATTGTCAGATTCAAAGCATATTACTACGCCAAAGAAGAAAAACTTCTTGTCTATGATTATCTCCCTAACGGAAGCTTGCATGCTCTTCTTCATGGAAATCGTGGTCCCGGAAGAATTCCACTGGATTGGACCACAAGAGTAAGCTTGGTGCTAGGTGCAGCAAGAGGGCTGGCTCGTATTCATGCAGAATACAATGCAGCAAAAATACCTCACGGAAACGTCAAATCTTCGAACGTGCTTCTTGACAAGAATGGCGTCGCTTGCATCTCCGACTTCGGCTTGGCCCTATTACTGAACCCTGCTCACGCAATTGCCAAATTGGGCGGATACAGAGCTCCAGAACAAGCAGAAGTGAAGAGGCTGTCTCAGCAAGCAGACGTATACAGTTTCGGAGTCTTACTATTGGAAGTTCTCACCGGGAGAGCTCCTTCGCAGTACCCTTCACCGACTCGACCTACCGTCGTCGACGAAGAGGAACAAGACGTGGATCTTCCCAAATGGGTTCGATCCGTTGTGAAGGAAGAGTGGACAGCAGAAGTGTTTGATCAAGAACTCTTGCGTTACAAGAACATAGAGGAAGAACTGGTTTCAATGCTGCATGTGGGGTTGGCTTGTGTGGCTTCACAGCCAGAGAAGAGGCCAACAATGGCGGAAGTAGCCAAGATGATTGAGGACATAAGAGTGGAACAATCTCCATTAGCAGAGGACTACGATGAATCGCGTAATTCACTTTCACCATCCCTTGCCACCACTGAAGATGGCCTTCCTTGA 2046 0.5034 MNKPHALNLAFAFAFTLAFLCFTTSLCLAQNDTQVLTRFRLQTDAHGYLLSNWTGADACSATWRGVYCSSNGRVVSFSLPSLNLRGPIDSLSSLVHLRLLDLHDNRLNGSIAALSNCTRLRLLYLSHNDFSGEIPQGIASLKHLLRLDLSDNNIHGPIPNELSSLTHLLTLRLQNNVLSGKVPDLSVSLVNLTELNFTNNELYGRLSDGMLKKFGDKTFSGNEGLCGSTPFPICSFTDSPPSSASPPQIVPSNPSSLPESQTSVIVTPKTQRRKGLSPGAIVAIVVANCVALLVVTSFIVAHCCARGRSSNSMVGSENGKRKSGSSGSGSEKKGYVNNGGADIDGTSGTDRSRLVFFDRRNQFELEELLRASAEMLGKGSLGTVYKAVLDDSSTVAVKRLKDANPCARNEFEQYMDIIGKVKHPNIVRFKAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRVSLVLGAARGLARIHAEYNAAKIPHGNVKSSNVLLDKNGVACISDFGLALLLNPAHAIAKLGGYRAPEQAEVKRLSQQADVYSFGVLLLEVLTGRAPSQYPSPTRPTVVDEEEQDVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVASQPEKRPTMAEVAKMIEDIRVEQSPLAEDYDESRNSLSPSLATTEDGLP 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0974 681 CDD STKc_IRAK 376 651 - -
Lele08g0974 681 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Lele08g0974 681 Pfam Protein kinase domain 374 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0974 681 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 446 661 - -
Lele08g0974 681 Gene3D Phosphorylase Kinase; domain 1 346 445 - -
Lele08g0974 681 Gene3D Transferase(Phosphotransferase) domain 1 446 671 - -
Lele08g0974 681 ProSiteProfiles Leucine-rich repeat profile. 96 118 IPR001611 GO:0005515
Lele08g0974 681 MobiDBLite consensus disorder prediction 237 262 - -
Lele08g0974 681 FunFam pollen receptor-like kinase 1 341 445 - -
Lele08g0974 681 SUPERFAMILY Protein kinase-like (PK-like) 374 648 IPR011009 -
Lele08g0974 681 MobiDBLite consensus disorder prediction 309 346 - -
Lele08g0974 681 ProSiteProfiles Protein kinase domain profile. 370 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0974 681 MobiDBLite consensus disorder prediction 656 681 - -
Lele08g0974 681 Gene3D Ribonuclease Inhibitor 117 234 IPR032675 -
Lele08g0974 681 SUPERFAMILY L domain-like 31 207 - -
Lele08g0974 681 MobiDBLite consensus disorder prediction 309 333 - -
Lele08g0974 681 FunFam Nuclear pore complex protein NUP107 29 184 - -
Lele08g0974 681 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 653 - -
Lele08g0974 681 Gene3D Ribonuclease Inhibitor 25 116 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0974 Lele-ChrLele08 6183927 6186116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0974 25 677 Receptor kinase-like Gene Family AT2G36570 67.625 0.0 899
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele08g0974 Pkinase 5.3e-35 CL0016