Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0971 ATGGAAGAAAGTGTGTCGGCTTCAACCCCACAACCACTCACAGCATCTCTGCCTCAGGTAACAAACAACAGTGCTGGGGCAATAGTGGTTGCAGAACCCGTGACAACGCCGGCAAGTGGCGGCCAAGGCAGCTTTGATTTGTTGGGGAAGAAGAAGAGAGGAAGGCCCAGAAAATATGACTCCGAAGGCAATCTAACGACGTCGTACCAGAAGCACCAGTCGCAGTCTGGCTCCGCCTTCTCTTTCTCCTCCTCCAAAAGGGCTCGACCCAAGCCTCTTCCCCACATTTTTGCATCATTTGGTGGGTTTTTGGCAAACACCGCTGGTGGGGATTTTACGCCTCACGTTGTGACTGTTCATACCGGAGAGGAAAAATTCTTTCATTTGCCCAGAATGGTCCCAGAGGAATATGCATTCTTTCTGCCAATGGAGCTATCTCCAGTGTTACAATGCGCCAACCTGGGTCGATTTGAGATTTTATCTCTGTCTGGGTCATTCACAATGAACGACAATGTTAGTGGCATGGCAAGTCGGACCGGTGGGTTGAGTGTCTCATTGGCTGGACCGGACGGACGGGTCATAGGAGGTGGAGTTGCCGGTTTATTGACAGCTGCTAGCCCAATCCAGATTGTGATGGGAAGCTTCATGTCAAACGGTTATTTCCATAAGAAACATAAGAAGAAGCAGAACCGAGAACAGACAGTGGCTTCTCCTCCAAATTCAGGGATGGCAGCTAGGCCTGTGTCACAAGAAAATCCTAATGGGGAAGCCTGCATGAAACCAGCGTCCCGGATAGCAGAAGAACAAGGCCTGACAGGATCTGAGGATGTCACTAACGGTAAACAGAGCTCAGATGTGCATTTGAACGGTTCTCAACATTTGTCGGATCAAAGGCCATACCCAGACTTCAATATATCTCTGCCTACCCAATAG 933 0.4962 MEESVSASTPQPLTASLPQVTNNSAGAIVVAEPVTTPASGGQGSFDLLGKKKRGRPRKYDSEGNLTTSYQKHQSQSGSAFSFSSSKRARPKPLPHIFASFGGFLANTAGGDFTPHVVTVHTGEEKFFHLPRMVPEEYAFFLPMELSPVLQCANLGRFEILSLSGSFTMNDNVSGMASRTGGLSVSLAGPDGRVIGGGVAGLLTAASPIQIVMGSFMSNGYFHKKHKKKQNREQTVASPPNSGMAARPVSQENPNGEACMKPASRIAEEQGLTGSEDVTNGKQSSDVHLNGSQHLSDQRPYPDFNISLPTQ 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0971 310 CDD DUF296 155 215 IPR005175 -
Lele08g0971 310 Gene3D - 141 236 - -
Lele08g0971 310 MobiDBLite consensus disorder prediction 233 248 - -
Lele08g0971 310 MobiDBLite consensus disorder prediction 223 310 - -
Lele08g0971 310 Pfam Plants and Prokaryotes Conserved (PCC) domain 149 215 IPR005175 -
Lele08g0971 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 25 123 IPR039605 GO:0003680
Lele08g0971 310 MobiDBLite consensus disorder prediction 272 310 - -
Lele08g0971 310 MobiDBLite consensus disorder prediction 33 86 - -
Lele08g0971 310 SUPERFAMILY AF0104/ALDC/Ptd012-like 111 225 - -
Lele08g0971 310 MobiDBLite consensus disorder prediction 1 20 - -
Lele08g0971 310 MobiDBLite consensus disorder prediction 61 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0971 Lele-ChrLele08 6163971 6165451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0971 48 249 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 40.171 1.96e-38 137