Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0950 ATGATGAATAAGAAGCGAAGAGCTGGAAGGAAGAAGTTCCAAGAGACTCGTCATCCAACATACAAAGGCGTGAGGCAGAGAAATGGTAAGTGGGTGTGCGAGCTTCGACAGCCTAACAACAACAAAGCACGCTTGTGGCTCGGCACTTTTGCGAACCCTGACATGGCCGCCATAGCCCACGACGTTGCTGCTCTTGCTTTCAAGGGCGATTCTGCGTCCTTGAATTTCCCCGACGCTGCTTCCTCCTTACCTCGCCTTAATTCGCGGACCTCCTCCCTCAGATCCATCCAGTTCGCGGCCATGGAAGCGGCTGAGAAGCTTCTCTGCGGCTACGATGAAGCTGAGAAGAACATCGCAGCTTTATCTCTGGACTGTAACTTTGAGTACTCGGAAGCATTAGAAGAAGAAGGGGAGGCGGCGGCGGCGGCGAGGAGTATGTATTGGGATGAAGAGGAGGTGTTTAACATGCCAGGACTCATGAACAGCATGGCAGAAGGGTTGATTATCACACCACCAGCCTTGAAGAGAGGCTTCAACTGGGATAATATGGAAACCACCACCACCGACTTGACTCTCTGGGGAGACTGA 588 0.5238 MMNKKRRAGRKKFQETRHPTYKGVRQRNGKWVCELRQPNNNKARLWLGTFANPDMAAIAHDVAALAFKGDSASLNFPDAASSLPRLNSRTSSLRSIQFAAMEAAEKLLCGYDEAEKNIAALSLDCNFEYSEALEEEGEAAAAARSMYWDEEEVFNMPGLMNSMAEGLIITPPALKRGFNWDNMETTTTDLTLWGD 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0950 195 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
Lele08g0950 195 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Lele08g0950 195 PRINTS Ethylene responsive element binding protein signature 59 79 IPR001471 GO:0003700|GO:0006355
Lele08g0950 195 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Lele08g0950 195 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Lele08g0950 195 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 3 193 IPR045277 GO:0003700
Lele08g0950 195 MobiDBLite consensus disorder prediction 1 21 - -
Lele08g0950 195 Gene3D AP2/ERF domain 20 78 IPR036955 GO:0003700|GO:0006355
Lele08g0950 195 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Lele08g0950 195 CDD AP2 21 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0950 Lele-ChrLele08 5994692 5995279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0950 5 193 AP2-EREBP Transcription Factor Family AT4G25470 46.597 3.42e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele08g0950 AP2 6.9e-10 CL0081