Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0949 ATGGCTCGCCAATTACAGGACCTTCTCCAGGAAGATCAAGAACCGTTCCTATTAAACGACTACATTTCTGATAGGCGGAATCAGCTGATGAAAAGGCCTTCTCCCAGCACCACTCTGCAACTCAAGAAACCAAAACCAATCCATCATCATAACTCAAGCTTCCCCCCCGATTTCTGTAAAAATGCTTGCTTTTTATCCTTTCGCAACACCCCTGATCTCTTGGAATTCGCATCTCCGGCCAAGAGCCCCTGTAAGTCCCCCAATGCCATCTTCCCCCATACCCCTTCTCGAACAGCCGCGCTCCGTCGCGAAGCTGCTCTCCGAATTCACAAACACTCCTCGTCTTCTAAATCTAAAACCCACAATAAGACCAACGGCTTTGGTTTATTCATGTCATTATTCAAGAGACTAACGCCGAGAAACCGAAATGGAGAAATACAGGGCGGTGGTGATGACGGAGGCAAGAAAAATCAAGAACAAATGGTATCTACTGATCAGTTGGGCCTTCCATGTTCTTACAATGGACGACCTAGCAGTGCTGTATGGCCCGAGACCAATGAGGATAAATCTTTTTACATGGAAACGTGCAGCAGTACTAGCTACTCCGATGAATCCCACGAGGTTGACCTTGGGTCCAAATCCAACCAGAAACACGTTAGAGATTGTCTTTGCTGTGATCACGACATCTGCGAAAGCCCTTTTCGCTTTGCATTACGGAGTAGCCCCTCTTGTGGCCACCAGACGCCGGAATTAATGTCACCGAGTCGCCCAAGAGCAGAGGAGAAAGAAAAGAACGGAACAGAGAGTGTCGAGAGATTACAATTAAGGGAGGAAGAAGAGGAAGAGAAGGAGCAATTCAGCCCGGTGTCTGTTTTAGACACACCCTTCGAGAACGATGACGAAGGGCATGAAAACAACGATGAGGATGACGGTTTTGATTTGGAGGGCAGCTCTGCCATTTTACAGAGAGCGAAGCACCAACTGTTGTACCAGCTTCGTAGTTTTGAGAAACTTGCAGGATTGGATCCGATTGAACTTGAGAAAATAATGTTAGAGGAAGAAGATGAAGACGATGAGACATCAGATGAAGTGAAGGACTTTAACAGGTTAGTCTTACAAGTCATCTGCCAATCTAGCATCCATGAGAAACAAGAGATCCCAGAAGATCACAAGAGACTGATTTCGGATCTCATTATGGAGGAAGAAAGAGAACTTAATTCCTCGGAGGAGAGGGAAATAGTGATAAGAAGGGTTTGCAAGAAGCTGGAATTGTGGAGAGAAGTGGAACATAAAACAATTGATATGATGATAGAACAAGACTTTAGTAGAGAGGACGATGGATGGAAGAAAAATGAAGAGCACAAGGAGGAGGTGGCAGGGGAGCTCGAACGTGCTATTTTTGGGCTTCTAGCGGAAGAATTTTCAGAGGAGCTAGCAATGGAGCTAATCATTATGAGGTTCAGTCCTGCAATTTGTGACTTTGCTGTATATCAAAGAACCTCTCGTTTTCAAATGACATGA 1521 0.4536 MARQLQDLLQEDQEPFLLNDYISDRRNQLMKRPSPSTTLQLKKPKPIHHHNSSFPPDFCKNACFLSFRNTPDLLEFASPAKSPCKSPNAIFPHTPSRTAALRREAALRIHKHSSSSKSKTHNKTNGFGLFMSLFKRLTPRNRNGEIQGGGDDGGKKNQEQMVSTDQLGLPCSYNGRPSSAVWPETNEDKSFYMETCSSTSYSDESHEVDLGSKSNQKHVRDCLCCDHDICESPFRFALRSSPSCGHQTPELMSPSRPRAEEKEKNGTESVERLQLREEEEEEKEQFSPVSVLDTPFENDDEGHENNDEDDGFDLEGSSAILQRAKHQLLYQLRSFEKLAGLDPIELEKIMLEEEDEDDETSDEVKDFNRLVLQVICQSSIHEKQEIPEDHKRLISDLIMEEERELNSSEEREIVIRRVCKKLELWREVEHKTIDMMIEQDFSREDDGWKKNEEHKEEVAGELERAIFGLLAEEFSEELAMELIIMRFSPAICDFAVYQRTSRFQMT 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0949 506 PANTHER OS04G0572500 PROTEIN 1 478 - -
Lele08g0949 506 MobiDBLite consensus disorder prediction 300 314 - -
Lele08g0949 506 MobiDBLite consensus disorder prediction 30 49 - -
Lele08g0949 506 MobiDBLite consensus disorder prediction 241 314 - -
Lele08g0949 506 MobiDBLite consensus disorder prediction 255 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0949 Lele-ChrLele08 5988807 5991839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0949 3 297 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 39.763 1.66e-40 149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2051 13 27640019 27653630 Lele08g0949 08 5988807 5991839 CCT
Lele15g0355 15 2028189 2029552 Lele08g0949 08 5988807 5991839 CCT
Lele08g0949 08 5988807 5991839 Lele08g0949 08 5988807 5991839 ECH
Lele05g1097 05 6829513 6832109 Lele08g0949 08 5988807 5991839 hybridization
Lele06g0963 06 5941611 5944763 Lele08g0949 08 5988807 5991839 hybridization