Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0936 ATGGCGAGTGGGCTCACAGGCGCTAATTCCAACGGGTTTTCGGGCTCTCGCGCCAATCCTGAGAAGCTCATTATCGATACTGACCCTGGGATCGATGATAGCATGGCAATCATGATGGCGTTTCAAACACCCGGGGTGGAGGTCCTGGGCTTGACAACCGTATTTGGTAATGTTTCTACAGAAGATGCCACTCGCAATTCATTGCTTTTGTGTGAGATTGCTGGCTGTCAAAATGTTCCAGTTGCAGAGGGCAACCCTGAGCCCTTGAAGGGTGGAATTCCACGAGTTGCTGACTTTATTCATGGTTCTGATGGGCTTGGAAACATATCCCTGCCCCCACCAAAAGCTAAAAAAATAGATAAAAGTGCTTCGGAGTTTTTGGTGGAGAAGGTTTCTGAATACCCTGGTGAAGTATCTGTGTTAGCACTTGGACCGCTGACAAATTTAGCTTTGGCCATCAGAAGAGATTCTTCTTTTGCTAGCAAGGTGAAGAGAGTGGTTATTCTCGGTGGTTCTTTCTTTGCCTTGGGGAATGTAAATCCAGCAGCAGAAGCAAATATCTACGGAGACCCAGAAGCAGCAGATATTGTGTTCACTTCTGGCGCAAATATTGTTGTTGTTGGAATAAATATTACAACCCAAGTGAAATTTACAGGTACTGAAAACTGTCTTTTGATTTCAGATGATGACCTCCTTCAATTGAAAAATTCCAGAGGAAAGCATGCACAGCTCTTAAGTGAGATGTGCAAATTTTACCGGGATTGGCACGTTAAATCTGATGGTGTCTATGGAATTTTCCTTCACGACCCTGTCAGTTTCGTAGCACTTGTTCGTCCAGATCTTTTTACATACAAGAGAGGGGTAGTGAGGGTAGAGACACGAGGCCTCTGTGTCGGGCACACACTAATGGACCAAGGGTTTAAAAAATGGAATTCGAGCAATCCATGGACGGGTTTTTCCCCTGTTTCAGTTGCTTGGACGGTGGATGTCGATGGGGTCACTAAGTACATCAAGGAGACATTAATGAAGCCCTGA 1035 0.4531 MASGLTGANSNGFSGSRANPEKLIIDTDPGIDDSMAIMMAFQTPGVEVLGLTTVFGNVSTEDATRNSLLLCEIAGCQNVPVAEGNPEPLKGGIPRVADFIHGSDGLGNISLPPPKAKKIDKSASEFLVEKVSEYPGEVSVLALGPLTNLALAIRRDSSFASKVKRVVILGGSFFALGNVNPAAEANIYGDPEAADIVFTSGANIVVVGINITTQVKFTGTENCLLISDDDLLQLKNSRGKHAQLLSEMCKFYRDWHVKSDGVYGIFLHDPVSFVALVRPDLFTYKRGVVRVETRGLCVGHTLMDQGFKKWNSSNPWTGFSPVSVAWTVDVDGVTKYIKETLMKP 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0936 344 FunFam Probable uridine nucleosidase 1 16 344 - -
Lele08g0936 344 SUPERFAMILY Nucleoside hydrolase 20 341 IPR036452 GO:0016799
Lele08g0936 344 MobiDBLite consensus disorder prediction 1 17 - -
Lele08g0936 344 PANTHER INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE 21 343 IPR023186 -
Lele08g0936 344 MobiDBLite consensus disorder prediction 1 21 - -
Lele08g0936 344 Pfam Inosine-uridine preferring nucleoside hydrolase 23 333 IPR001910 GO:0016799
Lele08g0936 344 CDD nuc_hydro_CaPnhB 22 342 - -
Lele08g0936 344 Gene3D - 9 344 IPR036452 GO:0016799
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0936 Lele-ChrLele08 5879285 5882423 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0936 08 5879285 5882423 Lele13g1670 13 25410177 25410605 CCT
Lele08g0936 08 5879285 5882423 Lele14g1614 14 23806368 23807882 CCT
Lele08g0936 08 5879285 5882423 Lele15g0745 15 4305374 4305886 CCT
Lele08g0936 08 5879285 5882423 Lele16g0751 16 4250515 4250943 CCT
Lele05g1084 05 6725372 6728758 Lele08g0936 08 5879285 5882423 hybridization
Lele06g0948 06 5831933 5835405 Lele08g0936 08 5879285 5882423 hybridization