Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0927 ATGGCGAAAGATTTCACGGTGCCGCCAGTGGTTTTTCCATCCGGTGGTAACCCCACCACCGGTGGAGCAAACATCGCGCAGAGGCGGGTTCCTACGGCGCCGTTTCAACCGCCTCGACCATCCAATTCCGGCATTCCGTTCATGTCCTTTGACATGGGGTCTGCAGCCGCAACTGCCTCCTCCGGCACAATTTACGGAGGCCCCCTCGGAGGCGGTAGCTCTGCGAACTTCGATGACGAGGAACCTCTGCTTGATGAGCTTGGGATCCACCCGGATCAAATCTGGAAGAAAATCAGATCGATACTCAATCCATACCGGGTAAATTACGTCGTGCACAAGGACTCTGATTTATCGGGGCCGATTCTTCTCTACATGTCCTTTTGCCTTTTCCAGCTACTTGCCGGAAAAATTCAATTCGGTGTGATCTTGGGTTGGATCGTGGTATCGTCTATCTTCTTATATGCGGTATTCAACATGTTGGCTGGTCGAACTGGCAATTTAGATCTGCATACTTGTACGAGTGTGGTTGGGTACTGTATGTTGCCCGTAGTGATTTTATCGGCTCTGTCTCTTTTCTTGCCGCAACTTGGGATCGTGAGGTTTGTGGTTGCTGCGGTATTTGTGCTGTGGGCAACAAAGTCTTCCACTGTTCTTATAGTTTCGCTTGCGGATGGTGGGGATGAACATCGCGGGTTGATAGCATATGCCTGTTTCTTGATTTACACCCTATTTTCATTGCTCGTCATATTCTAG 753 0.5007 MAKDFTVPPVVFPSGGNPTTGGANIAQRRVPTAPFQPPRPSNSGIPFMSFDMGSAAATASSGTIYGGPLGGGSSANFDDEEPLLDELGIHPDQIWKKIRSILNPYRVNYVVHKDSDLSGPILLYMSFCLFQLLAGKIQFGVILGWIVVSSIFLYAVFNMLAGRTGNLDLHTCTSVVGYCMLPVVILSALSLFLPQLGIVRFVVAAVFVLWATKSSTVLIVSLADGGDEHRGLIAYACFLIYTLFSLLVIF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0927 250 PANTHER GOLGI MEMBRANE PROTEIN YIP1 72 250 IPR045231 GO:0006888
Lele08g0927 250 Pfam Yip1 domain 127 247 IPR006977 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0927 Lele-ChrLele08 5834064 5834816 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0927 08 5834064 5834816 Lele13g1665 13 25389421 25391393 CCT
Lele08g0927 08 5834064 5834816 Lele14g1608 14 23782286 23785547 CCT
Lele08g0927 08 5834064 5834816 Lele15g0750 15 4331343 4333328 CCT
Lele08g0927 08 5834064 5834816 Lele16g0757 16 4270210 4272133 CCT
Lele08g0927 08 5834064 5834816 Lele08g0927 08 5834064 5834816 ECH
Lele05g1080 05 6688199 6692552 Lele08g0927 08 5834064 5834816 hybridization
Lele06g0940 06 5791895 5792647 Lele08g0927 08 5834064 5834816 hybridization