Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0913 ATGAAAGAAGCGCGCGATGCTTCCGTTGCAGTTGGGAGTTGGGACGTTCAATTTCAGGCATTTGTGAAAATTAGATGGAAATGCTCTCTCCTAAGCGATTTGCTTCTGAATCAGTTGATGAACATAATTGTGATCGTCTTTAGTTTCTTCGCAATTAAAGGAGTGCCTCCCCTAGTCCTTGCAATTATGAGTGCCCTTAACAATGTCTCTATATTGCCATTTTTCTCTCTATTGTGCTCAACTGATCGTGCATATCGTTTGAAGAAAACAATTGAGAGCCATTTCATTACGATTTTCCTTAATATGGATACTTCAAATCCTGCAGTCTTTGTCAATGGAGAGCTGCTACAGTTATATGTTGGACGGAGGGTAAGGGCTGTTGTGCAAGTTGTTCGATCTGATGCTGGAGGTATAATTGGAAAATTAACTGATGAGAAGCAGATAGTTGTAAAGGGCTTGCCCCCGGGTGCTCTTGCGAATTTTGTTGAAATTATTGGCATAGCTGACAGTGATAGATCCATTCATGCTGAGATATGGACCAACTTTGGTGATTCAATTGATGCCTTTAGTTACAATAAGCTTTGTCTTCTTGCAAATGGAGAGTTCAAGCACTTGTTCCTGTGA 624 0.4071 MKEARDASVAVGSWDVQFQAFVKIRWKCSLLSDLLLNQLMNIIVIVFSFFAIKGVPPLVLAIMSALNNVSILPFFSLLCSTDRAYRLKKTIESHFITIFLNMDTSNPAVFVNGELLQLYVGRRVRAVVQVVRSDAGGIIGKLTDEKQIVVKGLPPGALANFVEIIGIADSDRSIHAEIWTNFGDSIDAFSYNKLCLLANGEFKHLFL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0913 207 Gene3D - 102 207 IPR012340 -
Lele08g0913 207 Pfam Replication factor A protein 3 102 203 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Lele08g0913 207 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 100 207 - -
Lele08g0913 207 SUPERFAMILY Nucleic acid-binding proteins 107 206 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0913 Lele-ChrLele08 5765158 5769755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0913 102 207 Core DNA Replication Machinery Family AT4G18590 63.208 7.76e-49 153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0913 08 5765158 5769755 Lele08g0913 08 5765158 5769755 ECH
Lele06g0924 06 5731778 5733890 Lele08g0913 08 5765158 5769755 hybridization