Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0897 ATGGAAAATATGGCACCTGGATATCGGTTCTACCCAACTGAAGAGGAACTCATTTCCTTCTATTTGCACAGAAAGCTTGAAGGAGATCAGAGGGAAGACATCAACCGGGTTATACCTGTGCTTGATATTTATGAATATAATCCCTGGGATCTCCCACAGGTGTCGGGAGAGGCGAGTCTGAGAGACACGGAGCAGTGGTTCTTTTTCATTCCGAGACAAGAAAGCGAAGCTCGTGGAGGAAGACCAAGACGACTCACAACAACAGGCTACTGGAAAGCCACTGGGTCTCCGAACCATGTCTATTCCTCTGATAATCGCATCATCGGCATGAAAAGAACCATGGTTTTCTACAACGGAAGAGCCCCCAACGGCCGCAAAACCGATTGGAAGATGAACGAGTACAAGGCCATCGTCGGAGCCCAACCGTCCTCAACTCGCCCAACAGATCCTCTGTTAAGGCAGGAATACAGTTTATGCAGGGTGTACAAGAAATCAAAGTGCTTGCGAGCGTTTGACAGAAGGCCACCTCCAAGGAGAGAGACGGATGCTTATGGGGGTTCAAGCTCAATGTCGTCGTCTCATCAAAAAGTTCAAAACGCAGCGTCGGCTTCATCAAAGCGACCGATAGGAACAGCAAGCTCACCAGAGAGTTCATCATCAGGAGAGCATGGACAAGCTTCACAGAGTGGGGAAGGGTCGGGTCAAATGGATTTGGACGATGAGCCGTTGTTGGATTGGGAGCAAGTTGACTGGTTTCTTGGCAAGCATGACTCGACCGGGTGA 783 0.4955 MENMAPGYRFYPTEEELISFYLHRKLEGDQREDINRVIPVLDIYEYNPWDLPQVSGEASLRDTEQWFFFIPRQESEARGGRPRRLTTTGYWKATGSPNHVYSSDNRIIGMKRTMVFYNGRAPNGRKTDWKMNEYKAIVGAQPSSTRPTDPLLRQEYSLCRVYKKSKCLRAFDRRPPPRRETDAYGGSSSMSSSHQKVQNAASASSKRPIGTASSPESSSSGEHGQASQSGEGSGQMDLDDEPLLDWEQVDWFLGKHDSTG 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0897 260 MobiDBLite consensus disorder prediction 184 234 - -
Lele08g0897 260 Gene3D NAC domain 13 168 IPR036093 GO:0003677|GO:0006355
Lele08g0897 260 MobiDBLite consensus disorder prediction 170 241 - -
Lele08g0897 260 ProSiteProfiles NAC domain profile. 4 164 IPR003441 GO:0003677|GO:0006355
Lele08g0897 260 SUPERFAMILY NAC domain 3 164 IPR036093 GO:0003677|GO:0006355
Lele08g0897 260 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
Lele08g0897 260 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0897 Lele-ChrLele08 5675465 5676936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0897 2 251 NAC Transcription Factor Family AT5G22380 49.402 2.01e-77 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele08g0897 NAM 1.2e-31 No_clan