Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0894 ATGAATGAGACAGAAACAAGTGACTCCTTTTCGCGGCTGTGGCAAGCTCACCGGAGTCTCCTCCGTCTCAGCAAAATGTGGGCAAGCGCAGAAGGTGGTGCTCCGGAGGTCACTCTAGAGACTTCCATGGGTTCTTTCACCGTTGAGCTATACTTCAAGCATGCCCCCAGAACATGCAGAAACTTCATTGAACTCTCTCGAAGAGGCTATTACGATAACGTTAAATTCCACAGAATCATCAAGGACTTCATAGTACAAGGTGGAGATCCCACTGGAACAGGAAGGGGAGGAGAATCCATTTATGGTCCAAAATTTGAAGATGAGATAAGACAGGAGTTGAAGCACACCGGAGCTGGTATCTTATCCATGGCAAACGCTGGCCCAAATACTAACGGTAGTCAGTTCTTCATTACTTTGGCGCCATGCCCATCTTTGGATGGTAAACACACCATATTTGGAAGAGTTTGTCGGGGGATGGAAATTATCAAGAGACTTGGCAGTGTCCAAACTGATAACAATGATAGGCCCATCCATGATGTGAAGATACTAAGGACATCGGTCAAGGATTGA 570 0.4632 MNETETSDSFSRLWQAHRSLLRLSKMWASAEGGAPEVTLETSMGSFTVELYFKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQGGDPTGTGRGGESIYGPKFEDEIRQELKHTGAGILSMANAGPNTNGSQFFITLAPCPSLDGKHTIFGRVCRGMEIIKRLGSVQTDNNDRPIHDVKILRTSVKD 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0894 189 FunFam Peptidyl-prolyl cis-trans isomerase 27 189 - -
Lele08g0894 189 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 37 186 IPR002130 GO:0000413|GO:0003755
Lele08g0894 189 Gene3D - 17 189 IPR029000 -
Lele08g0894 189 SUPERFAMILY Cyclophilin-like 36 187 IPR029000 -
Lele08g0894 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 50 65 IPR002130 GO:0000413|GO:0003755
Lele08g0894 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Lele08g0894 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 146 IPR002130 GO:0000413|GO:0003755
Lele08g0894 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 88 IPR002130 GO:0000413|GO:0003755
Lele08g0894 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 162 IPR002130 GO:0000413|GO:0003755
Lele08g0894 189 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 40 187 IPR002130 GO:0000413|GO:0003755
Lele08g0894 189 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 71 88 IPR020892 GO:0003755|GO:0006457
Lele08g0894 189 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 34 187 IPR044666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0894 Lele-ChrLele08 5646004 5650044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0894 37 187 U-box Gene Family AT5G67530 49.669 2.77e-50 169