Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0882 ATGAAGCTACCGTTTATTGTCAAGAATAAGTCAGAAATGAGGTCATCTTCTTCTTCCTGGCCGTGGCCGTCTTGTCACCAACCCAGAACCCTCTCTTTCAGAGCCAACACCACCGACTCGGATTCTCCAGAAGTAATGGAAGTCGACCCCATAGAGTCATTGGTTCGCGGGTTGCGGTCGGACCGGAGGCGGTTGTTCTTCGAGCCAGATGACACTAGCTCGATATTAGAGACGAAAGCTTCTTCTGCAGAAGGAGGACGCGTGCCATTCAAAGACAGCTTCGTGTTATCCATGGAGTCTCGAGACCCTTACGAAGACTTTCGAAAGTCCATGGAGGAGATGGTGGAGGCTCACGCCCTCAAGCACTTAGAGGCTCTTCAGGAGCTTCTTTGTTGGTATTTGAGGGTCAATGCCAAAAGCAATCATGTCTGTATTCTCGCTGCTTTTGTAGATTTATTGGTTGGCCTTTCTCCTTCTTCTCCTTCTCCTTGCCCTTCTTCTTCTTCTCCTTTATCTTTCTCTACTTCGTCTCTGTCTTCTTCCTTTAGTACACGCTGTGTTAATGATTCTTCTTTGGAAGCCGAGGAAGAGGTTGATGCAACTGATCAGGCTTCAACTTCGGCTTCGTCGTTGTCACAACAAGTTAAGGAGGGGGATATTGACCCTCATGATGACGAGGCTTCTTCTTTGAATGCTTGA 699 0.4778 MKLPFIVKNKSEMRSSSSSWPWPSCHQPRTLSFRANTTDSDSPEVMEVDPIESLVRGLRSDRRRLFFEPDDTSSILETKASSAEGGRVPFKDSFVLSMESRDPYEDFRKSMEEMVEAHALKHLEALQELLCWYLRVNAKSNHVCILAAFVDLLVGLSPSSPSPCPSSSSPLSFSTSSLSSSFSTRCVNDSSLEAEEEVDATDQASTSASSLSQQVKEGDIDPHDDEASSLNA 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0882 232 ProSiteProfiles OVATE domain profile. 96 155 IPR006458 -
Lele08g0882 232 MobiDBLite consensus disorder prediction 201 216 - -
Lele08g0882 232 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 96 157 IPR006458 -
Lele08g0882 232 MobiDBLite consensus disorder prediction 192 232 - -
Lele08g0882 232 Pfam Transcriptional repressor, ovate 100 156 IPR006458 -
Lele08g0882 232 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 38 157 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0882 Lele-ChrLele08 5571633 5572331 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele08g0882 Ovate 1.1e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1552 14 23498796 23499443 Lele08g0882 08 5571633 5572331 CCT
Lele15g0797 15 4604163 4604798 Lele08g0882 08 5571633 5572331 CCT
Lele16g0815 16 4564783 4565430 Lele08g0882 08 5571633 5572331 CCT
Lele08g0882 08 5571633 5572331 Lele08g0882 08 5571633 5572331 ECH
Lele05g1031 05 6406548 6408196 Lele08g0882 08 5571633 5572331 hybridization
Lele06g0893 06 5553768 5554463 Lele08g0882 08 5571633 5572331 hybridization