Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0880 ATGTCTAGCTCCAGAAAGAAGCTTCTTTTCAACACCGTGTCCGTCGACCTAGGCTGCGGCAACTGCAGGAAACCGAAGATTTCTCACATACTCCATCCCAAGCCCACCAACCAAAAGCTCCAATCCCACAACTATTCTTCTTCAAGCTCCTGGGACAACGACGACACCACCGCCACGTTCTCTCCCTACGGAAGCTCTTCTAAGGTTTCCAATGGCGAAAACAACGGGAGGGAGACGAAGACGGTGAGGGGTTTGGGCAGGGTGGGAGGCGAAGGTGTGGCTGTGGAGAAAGATTCCGACGACCCTTATTTGGACTTCAGGCACTCCATGCTCCAAATGATACTGAAGAACGAGATTTACTCCAAGGGTGATCTCAGAGAGCTTCTGAGATGGTTTCTTCTTCTCAATTCACCGTACCACCACGGGGTTATCGTCAGAGCTTTCACTGAGATCTGGAATGGGTTGCATTCTGTGAGGCCCAACTCAGCCAAGTTTCCCTTGTCTTGCGAGTCACGTGTGTCCTAA 525 0.5124 MSSSRKKLLFNTVSVDLGCGNCRKPKISHILHPKPTNQKLQSHNYSSSSSWDNDDTTATFSPYGSSSKVSNGENNGRETKTVRGLGRVGGEGVAVEKDSDDPYLDFRHSMLQMILKNEIYSKGDLRELLRWFLLLNSPYHHGVIVRAFTEIWNGLHSVRPNSAKFPLSCESRVS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0880 174 MobiDBLite consensus disorder prediction 28 83 - -
Lele08g0880 174 Pfam Transcriptional repressor, ovate 99 155 IPR006458 -
Lele08g0880 174 MobiDBLite consensus disorder prediction 34 78 - -
Lele08g0880 174 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 46 156 IPR038933 GO:0045892
Lele08g0880 174 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 93 156 IPR006458 -
Lele08g0880 174 ProSiteProfiles OVATE domain profile. 95 154 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0880 Lele-ChrLele08 5565819 5566343 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele08g0880 Ovate 8.8e-22 No_clan