Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0855 ATGATGGAGAGAGGGTGGAAGCATAATACTGAGATACCACCTAATTGTCCCAGGTGTGGCTCTTGCAACACCAAGTTCTGCTATTACAATAACTACAGCTTAACTCAACCTCGCTACTTTTGCAAAGCCTGTAGAAGATATTGGACCAAAGGAGGATCCCTCCGCAACGTCCCTGTCGGCGGTGGCTGCCGGAAAACCAGGCGCCATACTACCAAGACTTTACGAGTACACTCAGCCTTGACTAATGCCCATCCCTCAACTGTTTCATCTTCTAGCTCCTCATCACTGCCGGCGGCTGATCATGCTCCACATATTGATCTTGCCCTGATTTATGCCAATTTTCTCAATCAAAACCCAGGTTCAAGTGATCAGGAGCCACACCATCATCAATTCATGAAAACACTAGGTTTTGATCCTTGCATAGAGTATTCGAGTCTATCCGACATAGTTTTTGGTCTTTCTGAACCATCCACAATAATAGAGTCCCATTTCAATGTTGTTGGGGATCATCATCATCTGGGTGGGTTATTCAACTCCATGCAAGAGCATAAGGAGGACGGAATAATTGGTACCAGCGATTTTGAGCTGCCAACATTACCAGGGGAAGAGGTAGCGTCGCAATATGATATGATGGTATGGTCCTCCGAAGAATCTCATCATGATAAGATGATGGTCGTAAACCAGGCGCCACCTGGAGTTCAACCTCATCATGTCAATGGTAATTGGGGACTCCTTCATTACTCGACCAATGTTTCTCTTCCCAGCCTTTGA 771 0.4578 MMERGWKHNTEIPPNCPRCGSCNTKFCYYNNYSLTQPRYFCKACRRYWTKGGSLRNVPVGGGCRKTRRHTTKTLRVHSALTNAHPSTVSSSSSSSLPAADHAPHIDLALIYANFLNQNPGSSDQEPHHHQFMKTLGFDPCIEYSSLSDIVFGLSEPSTIIESHFNVVGDHHHLGGLFNSMQEHKEDGIIGTSDFELPTLPGEEVASQYDMMVWSSEESHHDKMMVVNQAPPGVQPHHVNGNWGLLHYSTNVSLPSL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0855 256 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
Lele08g0855 256 ProSitePatterns Zinc finger Dof-type signature. 16 52 IPR003851 GO:0003677|GO:0006355
Lele08g0855 256 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 11 148 IPR045174 GO:0003700|GO:0006355
Lele08g0855 256 Pfam Dof domain, zinc finger 15 68 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0855 Lele-ChrLele08 5389368 5390138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0855 9 214 C2C2-Dof Transcription Factor Family AT3G52440 44.231 1.20e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele08g0855 zf-Dof 1.5e-30 No_clan