Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0849 ATGGCAACTATTCGAATGATAGATATAGCTGTCAACTTCACAGGTTCTCCAACAGATGGAATGTTCAAAGGAATCTACAACGGCAAGCAATGTCACGTCTCAGATATTGCAATGGTCTTGAGCAGAGCTTGGAGTGCAGGGGTCGACCGAATTATTGTAACTGGTGGATCCCTTGAGGAATCAAGGGAAGCTCTTGCAATTGCAGAAACAGATGGACGGCTTTTCTGCACAGTTGGTGTGCATCCAACACGTTGTAAGGAATTTGAGGAGGGTGGAGATCCAGAAAAGCATTTTCAGGCTATTTTGTCATTGGCTAAAGAAGGAATTCAAAAGGGAAAGGTTGTTGCAGTTGGAGAATGTGGATTAGACTATGATAGGCTTCACTTTTGCCCCGCTGAGATTCAAAAGAAGTATTTCGAGAAGCAATTTGAATTAGCACATATCACAAAACTGCCAATGTTTCTGCACATGCGAGCAGCTGCTGCAGATTTTTGTGAATTGGTTGAGAGAAATAGGGACAGGTTCACTGGTGGAGTGACTCATTCATTTACTGGCAGTGCAGAAGATTGTATTAAGGTTCTCTCATTTGATAATATGTACATAGGCATAAATGGCTGCTCTTTGAAGACAACTGGGAACCTTGATGTAGTGAAAGGTATTCCTGTTGAGAGAATGATGATTGAAACAGACTCACCATACTGTGAAATCAAGAACACTCATGCGGGAATTGGATTTGTTAAATCTACATGGCCTTCTAAAAAGAAGGAGAAGTATGATCAAGAATGCATTGTCAAAGGCCGAAATGAACCTTGTTTGGTTAGGCAAGTTCTTGAGGTGGTTGCTGGCTGTAAAGGCATCAACGACTTGGGTAAACTTAGTGAAACATTGTACCAAAACACTTGCAGGGTTTTTTTCCCGCATGACCTGGACTCTGCGGCAGATGCTCTTCTAGCCGGTGGCGATACCTCGTAG 972 0.427 MATIRMIDIAVNFTGSPTDGMFKGIYNGKQCHVSDIAMVLSRAWSAGVDRIIVTGGSLEESREALAIAETDGRLFCTVGVHPTRCKEFEEGGDPEKHFQAILSLAKEGIQKGKVVAVGECGLDYDRLHFCPAEIQKKYFEKQFELAHITKLPMFLHMRAAAADFCELVERNRDRFTGGVTHSFTGSAEDCIKVLSFDNMYIGINGCSLKTTGNLDVVKGIPVERMMIETDSPYCEIKNTHAGIGFVKSTWPSKKKEKYDQECIVKGRNEPCLVRQVLEVVAGCKGINDLGKLSETLYQNTCRVFFPHDLDSAADALLAGGDTS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0849 323 Pfam TatD related DNase 31 304 IPR001130 GO:0016788
Lele08g0849 323 PANTHER TATD FAMILY DEOXYRIBONUCLEASE 5 310 - -
Lele08g0849 323 CDD TatD_DNAse 31 305 IPR001130 GO:0016788
Lele08g0849 323 SUPERFAMILY Metallo-dependent hydrolases 6 305 IPR032466 -
Lele08g0849 323 FunFam Putative tatD related deoxyribonuclease 1 311 - -
Lele08g0849 323 Gene3D - 1 311 - -
Lele08g0849 323 PIRSF DNase_TatD 1 308 IPR001130 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0849 Lele-ChrLele08 5347923 5350958 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0999 05 6180611 6184602 Lele08g0849 08 5347923 5350958 hybridization
Lele06g0859 06 5340455 5345765 Lele08g0849 08 5347923 5350958 hybridization