Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0838 ATGGGTAATAACTGCGTTGGATCAAGAATCTCCAGGGATGCATTATTTCCCTCCTTTTCCAGTTCACTTTGGTGGTCACGACCAACTGGGGATATGGTTTCTCCTACCAGTAAATCATCGTCCAGAAGCGAAGTTCCAAATGTTTCAGAGATTGTTCAAAGCAGCCCACCCGAGATATTGAGAATCGACAAGGTAGAGATGAAGCCAATACAGGAGATAAAACCACCTCAACCTCAAAAACTGGATGAAGAGATTAAATCTTCCAAGCCACCGATGGAGGAATCAAGACTACCACAGTCGGTGAAGCTGAGGCAAACGGAAGAGGCCGGACCGATTCCGACGAGTGTACAAAAGGAAGAGATTATTCAACAAGTGGAACCTAAAAAACAAAAAAAGCCCCACAAGGTGAAGAGGCTTGCATCTGCAGGGCTGCAAGCAGATTCTGTTTTGCAAACAAAAACTGGTCATCTTAAGGAGTTCTATAAACTGGGGCGAAAGCTTGGACATGGGCAATTTGGAACGAGTTTCCTTTGTGTGGAGAAAGGCACAGGTAAAGAATATGCATGCAAGTCCATTGCTAAGCGTAAATTGCTGACATATGAGGATGTTGAGGATGTGAGGAGGGAGATTCAGATAATGCATCACTTGGCAGGATGCCCTAATGTGATATCCATAAAAGGAGCTTATGAGGATCCCGTGGCAGTTCATGTTGTGATGGAACTATGTGCAGGAGGTGAACTGTTTGATAGGATTGTGGAAAGAGGCCATTACACTGAAAGAAAAGCAGCAAAACTTGCCAGGACTATAGTTAGTGTTATAGAAGCTTGTCTCTCCCTCGGAGTCATGCATCGGGATCTTAAACCCGAGAATTTTCTTTTCGTTAGTAAGGATGAAGACTCCCCCCTTAAGGCTATCGATTTCGGATTGTCTACATTTTTCAAACCAGGAGAAACTTTCTCAGACGTTGTAGGAAGTCCTTATTATGTTGCACCAGAAGTTCTGTACAAGTGTTATGGTCCAGAAGCAGATGTGTGGAGTGCTGGTGTGATGATTTATATTCTGCTATGTGGGGTGCCTCCATTTTGGGCTGAAACAGAGGAGGATATATTCAAGGAGGTTTTGGAAGGGAAGCTTGATTTCTCATCAGATCCTTGGCCTAAAATCTCAGACAGTGCTAAAGACTTAGTGAGGAAGATGCTTACTAGAGATCCAAGAAAAAGGATAACTGCTCATGAAGTTCTTTGTCATCCTTGGATACGACTTGATGGAGAAGCTCCAGACAAACCTCTTGATTCAGCAGTGTTGAGTCGCCTGAAGCAGTTTTCAGCCATGAATAAGCTCAAGAAAATGGCTATAAGAGTGATTGCAGAGAAGCTCTCTGAAGAAGAAATTGCTGGATTGAAAGAAATTTTTAAGATGATAGACACAGACAACAGTGGTCAAATTACATTCGAAGAACTAAAGAATGGACTGAAAAGATTTGGGGCTGATCTAAATGAATCAGAAATACATGATCTAATGCAAGCCGCAGATGTTGATAACAGTGGAACAATTGACTACAAAGAATTCATAGCTGCCACATTGCACTTAAATAAAATTGAGAGAGAAGACCACTTAGTTGCAGCATTCTCATACTTCGATAAAGATGGAAGTGGCTATATCACACCAGATGAGCTTCAACAAGCTTGCCAAGAATTTGGCATAGAAGATTTCCACTTGGAAGAAATTATCAGAGAAGCAGATCAAGATAACGATGGGCAAATAGATTACAAGGAATTTGTGGCAATGATGCAAAGAGGCAACACAGAAATGGGCAAAAAGGGTGAAAGAGGTAGCAATAGATTTAAGATTGGATATAGGGAGGCTCTATCAGTGTATTAA 1881 0.4184 MGNNCVGSRISRDALFPSFSSSLWWSRPTGDMVSPTSKSSSRSEVPNVSEIVQSSPPEILRIDKVEMKPIQEIKPPQPQKLDEEIKSSKPPMEESRLPQSVKLRQTEEAGPIPTSVQKEEIIQQVEPKKQKKPHKVKRLASAGLQADSVLQTKTGHLKEFYKLGRKLGHGQFGTSFLCVEKGTGKEYACKSIAKRKLLTYEDVEDVRREIQIMHHLAGCPNVISIKGAYEDPVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVSVIEACLSLGVMHRDLKPENFLFVSKDEDSPLKAIDFGLSTFFKPGETFSDVVGSPYYVAPEVLYKCYGPEADVWSAGVMIYILLCGVPPFWAETEEDIFKEVLEGKLDFSSDPWPKISDSAKDLVRKMLTRDPRKRITAHEVLCHPWIRLDGEAPDKPLDSAVLSRLKQFSAMNKLKKMAIRVIAEKLSEEEIAGLKEIFKMIDTDNSGQITFEELKNGLKRFGADLNESEIHDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLVAAFSYFDKDGSGYITPDELQQACQEFGIEDFHLEEIIREADQDNDGQIDYKEFVAMMQRGNTEMGKKGERGSNRFKIGYREALSVY 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0838 626 ProSitePatterns EF-hand calcium-binding domain. 475 487 IPR018247 -
Lele08g0838 626 SMART serkin_6 161 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0838 626 ProSiteProfiles EF-hand calcium-binding domain profile. 534 569 IPR002048 GO:0005509
Lele08g0838 626 MobiDBLite consensus disorder prediction 70 113 - -
Lele08g0838 626 PANTHER SERINE/THREONINE-PROTEIN KINASE 148 593 - -
Lele08g0838 626 CDD STKc_CAMK 160 418 - -
Lele08g0838 626 Gene3D - 444 603 - -
Lele08g0838 626 SMART efh_1 538 566 IPR002048 GO:0005509
Lele08g0838 626 SMART efh_1 572 600 IPR002048 GO:0005509
Lele08g0838 626 SMART efh_1 466 494 IPR002048 GO:0005509
Lele08g0838 626 SMART efh_1 502 530 IPR002048 GO:0005509
Lele08g0838 626 ProSiteProfiles EF-hand calcium-binding domain profile. 498 533 IPR002048 GO:0005509
Lele08g0838 626 FunFam Calcium-dependent protein kinase 1 163 246 - -
Lele08g0838 626 Gene3D Phosphorylase Kinase; domain 1 163 246 - -
Lele08g0838 626 SUPERFAMILY Protein kinase-like (PK-like) 160 420 IPR011009 -
Lele08g0838 626 Pfam Protein kinase domain 161 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0838 626 Gene3D Transferase(Phosphotransferase) domain 1 247 443 - -
Lele08g0838 626 FunFam Calcium-dependent protein kinase 1 427 601 - -
Lele08g0838 626 FunFam Calcium-dependent protein kinase SK5 247 431 - -
Lele08g0838 626 MobiDBLite consensus disorder prediction 21 56 - -
Lele08g0838 626 ProSitePatterns EF-hand calcium-binding domain. 581 593 IPR018247 -
Lele08g0838 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Lele08g0838 626 ProSitePatterns EF-hand calcium-binding domain. 511 523 IPR018247 -
Lele08g0838 626 ProSiteProfiles Protein kinase domain profile. 161 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0838 626 MobiDBLite consensus disorder prediction 77 91 - -
Lele08g0838 626 SUPERFAMILY EF-hand 458 599 IPR011992 -
Lele08g0838 626 Pfam EF-hand domain pair 538 598 IPR002048 GO:0005509
Lele08g0838 626 ProSiteProfiles EF-hand calcium-binding domain profile. 572 603 IPR002048 GO:0005509
Lele08g0838 626 ProSiteProfiles EF-hand calcium-binding domain profile. 462 497 IPR002048 GO:0005509
Lele08g0838 626 MobiDBLite consensus disorder prediction 21 54 - -
Lele08g0838 626 Pfam EF-hand domain pair 479 529 IPR002048 GO:0005509
Lele08g0838 626 ProSitePatterns EF-hand calcium-binding domain. 547 559 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0838 Lele-ChrLele08 5269016 5271681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0838 1 605 EF-hand Containing Proteins AT3G10660 66.509 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele08g0838 Pkinase 1.8e-71 CL0016