Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0830 ATGGAGAAGAAGAATTCGAGTGGGTTGGCGAGGACGAAATCGGAGCAGTTAGTGGAGACGGTGGTTGCAGAGCTGAAGTCGGCGCCGTCGAGCGAGTCGATAAACTTGATAATGGATAGTGGGGGAAGCGGAGGAACACTGTCGAGGAAGTCGAGTAGGAGGATGTCGCCGGGAGGGAAAAACAGCCACATAAGGAAGAGTAGGAGTGCTCAGATAAAGGTGGATTTGGACGAAGTAGGCAGCGGCGCCGCCCTGAGCCGAGCTTCCAGCGCCAGCTTGGGCCTCTCCTTCTCCTTCACCGGCTTCACGCTTACTCCTGATGAAATCGCTGACTCTAGGCCCTTCAGGGACCAAGACATTCGTAAAGCATTTTGTCTCACTGATAGGCCCCTCATTAAAGTTAAACTTGACTTTCTCATCGCTCTGTTAGTTAGCATAACGGAGGATATTGAAGCTGGAACTTGCCACTTCAAGTTTCAAACGGAACCCACTTTGCCTATTTTCCTCAAGTTCAAGGATGTGAGCTACAAGGTGGTGATCAAGGGCATGACAACAAGTGAGGAGAAGGATATCTTAAATGGGATTACTGGTTGCGTGAATCCAGGCGAAGTTTTGGCACTGATGGGACCCTCAGGGAGTGGAAAGACTACCCTTTTGAATCTTCTAGGAGGCCGGTTGATTCAGTCCACTGCTGGTGGTTCTATCACTTACAATGACCAGCCATATAGCAAATATCTCAAAAGCAAGATAGGATTTGTGACTCAAGATGATGTTCTGTTTCCTCACCTTACTGTGAAAGAAACACTTACATACGCAGCCCGTCTACGACTCCCCGATACATTCACAAAGGACCAGAAGGAAAAACGAGCCTTCGATGTCATCTATGAACTTGGCTTGGAAAGGTGCAAAGACACTATGATCGGTGGCTCCTTTGTTCGGGGGGTATCTGGAGGAGAGAGGAAAAGAGTTTGCATCGGTAATGAGATTATAATCAATCCTTCGCTTCTCTTTCTGGATGAACCAACTTCTGGTTTGGATTCTACAACAGCCTTAAAGATCGTTCAGATGCTACAAGACATAGCAGAGTATCTAGCGGAAGCATACGAGATTCGAGTTTCTGAAACAGAGAAGAGAAAGCTAATGGTGCCCATCCCACTTGATGAATCACTGAAGTCTAAGGTTTGTTCTCCTAAAAGACAGTGGGGTGCAAGGTGGTGTGAGCAGTATTCCATACTGTTCTGCAGAGGAATAAAAGAACGGAGGCATGACTATTTCAGCTGGTTAAGAATCACCCAAGTTCTCTCTACTGCAGTCATCTTAGGATTACTTTGGTGGCAATCAGATGCTAACAACCCAAAAGGTCTTCAAGACCAGGCAGGGTTACTTTTCTTCATAGCGGTGTTCTGGGGATTCTTTCCGGTGTTCACGGCAATATTCACATTTCCTCAAGAGAGAGCAATGTTGGCAAAGGAGAGAGCAGTTGACATGTACAGGCTAAGTGCATATTTTGTGGCTAGGACTACAAGCGATGTTCCATTGGACTTAATACTACCAGTTCTGTTCCTGCTGGTTGTCTATTTCATGGCCGGTCTGAGACTAAGTGCCGACTCCTTTTTCTACAGCATTCTCACCGTCTTCCTCTGCATCCTGGCAGCTCAGGGACTTGGACTCGCTATTGGGGCGACACTAATGGACTTGAAGAAAGCAACAACTCTAGCTTCCGTGACTGTAATGACCTTCATGCTGGCCGGAGGATTTTTCGAAGTACCGAAATTCATATCGTGGATTCGGTACATTTCATTTAACTACCACACATACAAACTTCTATTGAAAGTGCAATATGGAGGGCTCTCGCGATACAAAAATGGGATGAGAATTGACGATGGTTGGACAGAGGTTGGAGCTCTGATAGCAATGGTTTTTGGTTATCGGTTATTAGCGTACCTTTCGTTGAGGCGGATGAAGCTTCCATGCGGATATTAG 1983 0.4655 MEKKNSSGLARTKSEQLVETVVAELKSAPSSESINLIMDSGGSGGTLSRKSSRRMSPGGKNSHIRKSRSAQIKVDLDEVGSGAALSRASSASLGLSFSFTGFTLTPDEIADSRPFRDQDIRKAFCLTDRPLIKVKLDFLIALLVSITEDIEAGTCHFKFQTEPTLPIFLKFKDVSYKVVIKGMTTSEEKDILNGITGCVNPGEVLALMGPSGSGKTTLLNLLGGRLIQSTAGGSITYNDQPYSKYLKSKIGFVTQDDVLFPHLTVKETLTYAARLRLPDTFTKDQKEKRAFDVIYELGLERCKDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALKIVQMLQDIAEYLAEAYEIRVSETEKRKLMVPIPLDESLKSKVCSPKRQWGARWCEQYSILFCRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLAKERAVDMYRLSAYFVARTTSDVPLDLILPVLFLLVVYFMAGLRLSADSFFYSILTVFLCILAAQGLGLAIGATLMDLKKATTLASVTVMTFMLAGGFFEVPKFISWIRYISFNYHTYKLLLKVQYGGLSRYKNGMRIDDGWTEVGALIAMVFGYRLLAYLSLRRMKLPCGY 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0830 660 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 148 362 - -
Lele08g0830 660 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 362 IPR027417 -
Lele08g0830 660 SMART AAA_5 201 376 IPR003593 -
Lele08g0830 660 ProSitePatterns ABC transporters family signature. 315 329 IPR017871 GO:0005524|GO:0016887
Lele08g0830 660 MobiDBLite consensus disorder prediction 26 68 - -
Lele08g0830 660 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 169 414 IPR003439 GO:0005524
Lele08g0830 660 Pfam ABC transporter 192 343 IPR003439 GO:0005524
Lele08g0830 660 MobiDBLite consensus disorder prediction 26 65 - -
Lele08g0830 660 Pfam ABC-2 type transporter 408 614 IPR013525 GO:0016020|GO:0140359
Lele08g0830 660 Gene3D - 168 374 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0830 Lele-ChrLele08 5237817 5243697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0830 191 359 Calmodulin-binding Proteins AT2G36910 31.429 2.70e-12 68.6