Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele08g0811 | ATGAAAACGTGCGAGAAGACGAAAATGAGAGAGAGAGGATCTGGCGACCTAAATCTATGCTACGATGTGGAGAAGACGAACGAAAGGAGGATGCACGCCGCCATCAACGCCCGACTAAGCTCCGCTAGTGACATAATTGCCGGCGACCCAAATCTGCACTGCGTTGGGGTTCTTCTTCACCAGACTATGACTGTGGGCGGCGATGGAAAAGGGAAGAGTATTGATACCGTTGAGAAATCTAAATATCTTTTGACAAAAAGGAGAGAGAGCGATATCTTCGCAAGGGGTTCAACCCGGTTTCAAAGTTCATCTGTTTTTCAATTCTGCTACAATCGAAGCTCGTTTCTATACATCATTCATCACTTGCTCTCTCTTCCTGGTAGTTATCATCCGTTCGCTTTGTCTATTGGCATAGTAGTATTTTCCATCGGGAAGCCGAGTTGCTTTTTGACATTTCCTTGTAATCAACGAAGTCAAATATCTGCAGCTATGAGAACTTCATGGGCAGATTCTGTTGACAACTCAGCCATTGGTTCTTCAAATGCCAATGCGGCGCGTCCTTCTCGGTCAGCATATGTTCCACCACATCTTCGTAATAAGCCACCATCTTCAGAACCCCATATGACATCACACCCATCTTCGTTACCGGCGAATGATCGGGTAAATTTTGGCGGGTCAACTGCTGGTTATCGCGGTGCTGGTTCCTTTAATAAGCCTGACCATGGAAGGCAGGACTATGGTTCTAATGGTCGAATTGGTGGAGGTTGGAACAATAGAAGCGGAGGGTGGGACCGTGGAAGGGAGCGTGAGGTTAACCCATTTGAGAATGATGAAGCTACAGATCATACTTATAGCGAGCAAGAAAACACAGGCATTAATTTCGACGCTTATGATGATATCCCTGTGGACACTAGTGGGGATAATGTGCCTCCACCTGTAAATACTTTTGCAGAAATAGACTTGGGGGAGGCAGTGAATCAAAATATAAGGAGGTGTAAATACGTCAAACCAACTCCAGTTCAGAAGTACGCCATACCAATTTCTCTTGCGGGGCGAGATCTGATGGCTTGCGCTCAGACAGGATCAGGCAAGACAGCTGCCTTCTGTTTTCCTATCATAAGTGGAATCCTGAGGATGCCGCATGTTCAAAGACCACGTGTAGCACGAACTGCTTTCCCTCTGGCTCTTATCCTATCTCCTACCCGGGAGCTTTCCTGTCAGATACATGACGAGGCTAAAAAGTTTTCCTATCAAACTGGTGTTAAGGTGGTAGTTGCTTATGGAGGAGCACCAATAAACCAACAGTTGCGGGAGCTTGAGAGAGGAGTTGATATTCTTGTGGCAACTCCAGGACGTCTGGTAGATTTGTTAGAGAGGGCTAGGGTGTCACTGCAAATGATCAGATATTTAGCTCTCGATGAGGCAGATCGGATGCTGGATATGGGGTTTGAGCCTCAAATAAGAAAAATAGTTGAACAAATGGACATGCCTCCTCAAGGCATGAGACAAACAATGCTGTTTAGTGCCACTTTTCCCAAAGAGATACAGAGACTTGCATCAGATTTCCTCGACAATTATGTGTTTCTGGCTGTTGGAAGGGTCGGTTCAAGTACTGACCTAATTGCTCAACGAGTGGAATATGTCTTGGAATCTGACAAAAGAAGCCACCTCATGGACCTTCTTCATGCCCAGAGGGAAAATGGACTTTATGGCAAGCAAGGTCTGACATTAGTTTTTGTGGAAACAAAGAAAGGAGCTGATGCATTGGAACACTGGTTGTGCATTAATGGGTTTCCTGCAACTAGCATTCATGGTGACCGATCACAGCAGGAAAGGGAACTAGCATTGAGGTCGTTCAAGAGTGGAAACACACCAATTTTAGTGGCAACAGATGTTGCAGCGCGTGGTCTTGATATTCCACGTGTAGCTCATGTGGTAAATTTTGATCTTCCCAATGACATTGATGATTATGTGCATCGAATAGGAAGAACAGGGAGGGCCGGTAAAATGGGTTTAGCAACAGCCTTCTTCAATGACAATAATCTGTCATTGGCTAAGCCATTGGCTGATCTGATGCAAGAGGCAAATCAAGAAGTACCTGCCTGGCTCACACGTTATGCAGCTAGATCTTCCTATGGTGGTGGCAACAGAAACCGGCGTTCAGGGGGAGCTCGTTTCGGTGGCCGTGATTATAGGAGGGACAACCAACATAATAAAGGAGCTGACTACTATGGGGGAACAAGTGGATACGGTGTTCCTGCCACTTATGGTGGAGTTTATGGTCCTCCAGGGGTTACTAGCGCTTGGGATTAG | 2313 | 0.4609 | MKTCEKTKMRERGSGDLNLCYDVEKTNERRMHAAINARLSSASDIIAGDPNLHCVGVLLHQTMTVGGDGKGKSIDTVEKSKYLLTKRRESDIFARGSTRFQSSSVFQFCYNRSSFLYIIHHLLSLPGSYHPFALSIGIVVFSIGKPSCFLTFPCNQRSQISAAMRTSWADSVDNSAIGSSNANAARPSRSAYVPPHLRNKPPSSEPHMTSHPSSLPANDRVNFGGSTAGYRGAGSFNKPDHGRQDYGSNGRIGGGWNNRSGGWDRGREREVNPFENDEATDHTYSEQENTGINFDAYDDIPVDTSGDNVPPPVNTFAEIDLGEAVNQNIRRCKYVKPTPVQKYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGILRMPHVQRPRVARTAFPLALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPQGMRQTMLFSATFPKEIQRLASDFLDNYVFLAVGRVGSSTDLIAQRVEYVLESDKRSHLMDLLHAQRENGLYGKQGLTLVFVETKKGADALEHWLCINGFPATSIHGDRSQQERELALRSFKSGNTPILVATDVAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNDNNLSLAKPLADLMQEANQEVPAWLTRYAARSSYGGGNRNRRSGGARFGGRDYRRDNQHNKGADYYGGTSGYGVPATYGGVYGPPGVTSAWD | 770 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele08g0811 | 770 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 345 | 529 | IPR014001 | - | |
Lele08g0811 | 770 | SMART | ultradead3 | 333 | 544 | IPR014001 | - | |
Lele08g0811 | 770 | MobiDBLite | consensus disorder prediction | 723 | 739 | - | - | |
Lele08g0811 | 770 | FunFam | ATP-dependent RNA helicase RhlB | 532 | 711 | - | - | |
Lele08g0811 | 770 | MobiDBLite | consensus disorder prediction | 177 | 267 | - | - | |
Lele08g0811 | 770 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 282 | 707 | - | - | |
Lele08g0811 | 770 | MobiDBLite | consensus disorder prediction | 203 | 221 | - | - | |
Lele08g0811 | 770 | Pfam | Helicase conserved C-terminal domain | 553 | 668 | IPR001650 | - | |
Lele08g0811 | 770 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 314 | 342 | IPR014014 | GO:0003724 | |
Lele08g0811 | 770 | CDD | DEADc_DDX3_DDX4 | 315 | 535 | IPR044763 | GO:0003724|GO:0005524 | |
Lele08g0811 | 770 | Gene3D | - | 269 | 531 | IPR027417 | - | |
Lele08g0811 | 770 | SMART | helicmild6 | 587 | 668 | IPR001650 | - | |
Lele08g0811 | 770 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 556 | 707 | IPR001650 | - | |
Lele08g0811 | 770 | CDD | SF2_C_DEAD | 541 | 677 | - | - | |
Lele08g0811 | 770 | MobiDBLite | consensus disorder prediction | 712 | 744 | - | - | |
Lele08g0811 | 770 | Pfam | DEAD/DEAH box helicase | 338 | 518 | IPR011545 | GO:0003676|GO:0005524 | |
Lele08g0811 | 770 | Gene3D | - | 532 | 712 | IPR027417 | - | |
Lele08g0811 | 770 | FunFam | Probable ATP-dependent RNA helicase DDX4 | 276 | 531 | - | - | |
Lele08g0811 | 770 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 394 | 683 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele08g0811 | Lele-ChrLele08 | 5096506 | 5102842 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele08g0811 | 298 | 700 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 31.773 | 1.85e-60 | 208 |