Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0810 ATGAACTATCTAAGAGATATTTCTTTGCTAAAGTTGAAATATTACGCTCTGTACGAGACTTCCAAACTCTGTCAGTGTTATCAATACCTCCATTGCCGAGGCATAGTGAAGGTCCGGCTCAAATGGGTGAAAAACCGAAGTATTGATCACATAATTGACAAGGAAACGGATTTGAAGGCTGCTTGTCTCCTCAAGGACGCGATTAAGCGATCGTCCACTGGTTTTCTCACAGCAAAATCTGTAGCTGACTGGCAAAAACTGCTTGGCCTTACTGTCCCGGTTCTTCGTTTCATGCGTAGGTACCCCTCCCTCTTTGAAGAATTTCCACATCCTCGTTTGCCTAATTTGCCTTGCTTCCGTTTGACAGATACTGCAGTCTCGTTGGACTCGCAAGACCACAGCATTGACGAGGCCCGTGAGAGTGATGTTGTCGAACGGCTTTGTAAGGTACTTATGATGATGAGAACTCGAACTGTGCCGCTGCAGCCTTTGAAATGGGATCTGGGTTTACTGGATTGTTTTGAGAAAACACTTGTTCCAAAATTACCAGCTCATTTTCGATTTGTCAAGGCCTCAAACGATGTCACCTGCCTGCGACTAGCAAATTGGTGTGAGGAATTTGCAGTTTCAGCATTACAAAAGAGCGATGAAAGCAGGACATGTGGGGATGAGTACAGGCAATTCAAGAGAGGTCAAGCAGCTCTGGTTTTCCATGAATTTTCCAAGGGGTTATGGAGCACAGAAGAAAGGCTGGGAGAATCTGAGGAGGAAGAGTCTGGAACAGGTGATGAATTCTATGAGGTTGAAGATTCGGACCTAGAGGGAGCGTCTGGTGGAGAGTAG 843 0.4567 MNYLRDISLLKLKYYALYETSKLCQCYQYLHCRGIVKVRLKWVKNRSIDHIIDKETDLKAACLLKDAIKRSSTGFLTAKSVADWQKLLGLTVPVLRFMRRYPSLFEEFPHPRLPNLPCFRLTDTAVSLDSQDHSIDEARESDVVERLCKVLMMMRTRTVPLQPLKWDLGLLDCFEKTLVPKLPAHFRFVKASNDVTCLRLANWCEEFAVSALQKSDESRTCGDEYRQFKRGQAALVFHEFSKGLWSTEERLGESEEEESGTGDEFYEVEDSDLEGASGGE 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0810 280 MobiDBLite consensus disorder prediction 251 274 - -
Lele08g0810 280 Pfam Plant organelle RNA recognition domain 43 226 IPR021099 GO:0003723
Lele08g0810 280 MobiDBLite consensus disorder prediction 247 280 - -
Lele08g0810 280 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 33 243 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0810 Lele-ChrLele08 5093420 5094700 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0810 08 5093420 5094700 Lele13g1575 13 24806679 24819472 CCT
Lele08g0810 08 5093420 5094700 Lele14g1497 14 23176576 23182320 CCT
Lele08g0810 08 5093420 5094700 Lele15g0848 15 4925097 4930592 CCT
Lele08g0810 08 5093420 5094700 Lele16g0868 16 4892466 4897276 CCT
Lele08g0810 08 5093420 5094700 Lele08g0810 08 5093420 5094700 ECH
Lele05g0956 05 5919704 5921541 Lele08g0810 08 5093420 5094700 hybridization
Lele06g0822 06 5082805 5083793 Lele08g0810 08 5093420 5094700 hybridization