Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0806 ATGCCTGCTGGACATGGTTTGAGATCTCGAACTAGAGACTCGTTCTCTAGGCCATTCAGGAAGAAAGGTACCATAGCACTGACAACCTACCTTAGAACTTACAAAATCGGCGACTATGTGGACATCAAAGTTAATGGTGCGGTCCACAAGGGTATGCCTCACAAGTTCTACCATGGACGCACAGGCCGTGTCTGGAACGTAACCAAGCGTGCAATTGGTGTTGAAATGAACAAGCAGGTTGGGAACAGAATAATCAGAAAGAGAATTCATGTGCGTGTAGAGCATGTGATGCCCTCAAGGTGCACTGAGGAGTTCCGTCTGAGGAAAGTTCAGAACGATAAACTGAAGGCTGAAGCCAAGGCCAGGGGAGAAGTCGTCAGCACCAAGAGGCAGCCCGTGGGTCCTAAGCCAGGTTTCATGGTTGAAGGTGCTACATTGGAGACTGTAACACCCATTCCATACGATGTCGTCAACGATCTCAAAGGCGGCTGTCCTGAGAAGTTAGGGAGAAGTGAGAATATCAAGGCGCCATCCTTCCCTGCCCTGGACATTGCGTGTTCTTTTGGGCACAGACATAGAAGAAAACAGGACGATCAAGCAGAGTTCACACATTAA 615 0.4878 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEMNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKVQNDKLKAEAKARGEVVSTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGCPEKLGRSENIKAPSFPALDIACSFGHRHRRKQDDQAEFTH 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0806 204 Gene3D Ribosomal protein L21 1 97 IPR036948 GO:0003735|GO:0005840|GO:0006412
Lele08g0806 204 SUPERFAMILY Translation proteins SH3-like domain 3 99 IPR008991 -
Lele08g0806 204 Pfam Ribosomal protein L21e 1 101 IPR001147 GO:0003735|GO:0005840|GO:0006412
Lele08g0806 204 FunFam 60S ribosomal protein L21 1 98 - -
Lele08g0806 204 FunFam 60S ribosomal protein L21 99 158 - -
Lele08g0806 204 PANTHER 60S RIBOSOMAL PROTEIN L21 1 163 IPR001147 GO:0003735|GO:0005840|GO:0006412
Lele08g0806 204 ProSitePatterns Ribosomal protein L21e signature. 37 62 IPR018259 GO:0003735|GO:0005840|GO:0006412
Lele08g0806 204 Gene3D - 99 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0806 Lele-ChrLele08 5077710 5080046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0806 1 163 Cytoplasmic Ribosomal Protein Gene Family AT1G57860 84.049 8.92e-104 294