Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0786 ATGGTTGGTATGGGACAAAAAGATGCCTATGTTGGGGATGAAGCTCAATCAAAGAGAGGTATTTTGACTCTGAAATACCCGATCGAGCATGGTATTGTTAGCAATTGGGACGATATGGAGAAGATCTGGCATCACACTTTCTACAACGAGCTCCGTGTAGCTCCGGAAGAGCATCCCGTTCTCTTGACAGAGGCTCCTCTCAACCCAAAGGCTAACCGTGAGAAAATGACTCAGATTATGTTCGAGACCTTTAACACCCCCGCTATGTATGTCGCCATTCAGGCCGTCCTCTCCCTTTATGCTAGTGGCCGCACAACTGGTATTGTCCTGGACTCTGGAGATGGTGTCAGCCACACAGTTCCCATCTATGAAGGTTATGCCCTCCCACATGCAATCCTGCGTTTGGATCTTGCAGGGCGTGATCTCACAGATGCCCTCATGAAAATCTTGACTGAGCGTGGATACTCTTTCACCACTACTGCTGAGCGAGAAATTGTGAGAGATGTGAAAGAAAAACTGGCCTATATTGCTCTTGATTATGAGCAAGAGCTAGAAACTGCAAAGACCAGCTCAGCTGTTGAGAAAAGCTATGAGCTACCTGATGGTCAGGTGATCACAATAGGTGCTGAGAGATTCCGCTGCCCTGAAGTACTCTTCCAGCCGTCCATGATCGGGATGGAAGCTTCTGGCATACACGAAACAACTTATAACTCAATCATGAAGTGTGATGTGGATATCAGGAAGGATCTCTATGGTAACATCGTCTTGAGTGGTGGTTCCACAATGTTCCCTGGCATTGCTGATAGAATGAGCAAGGAGATTACAGCATTGGCACCCAGCAGCATGAAAATTAAAGTGGTGGCACCACCAGAGAGGAAGTACAGTGTCTGGATTGGAGGCTCCATTTTGGCATCCCTTAGCACCTTCCAACAGGTAGAGTGTGTGATTTTAACTTTCAAGTGCACAACTGTTGGAGCTTGTATAGATAATGTGACAGATCCAGCATGA 1008 0.4683 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEASGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVECVILTFKCTTVGACIDNVTDPA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0786 335 FunFam Actin, alpha skeletal muscle 1 139 - -
Lele08g0786 335 Pfam Actin 7 312 IPR004000 -
Lele08g0786 335 SUPERFAMILY Actin-like ATPase domain 1 110 IPR043129 -
Lele08g0786 335 PANTHER ACTIN 8 314 IPR004000 -
Lele08g0786 335 CDD NBD_sugar-kinase_HSP70_actin 31 138 - -
Lele08g0786 335 Gene3D - 95 295 - -
Lele08g0786 335 SMART actin_3 1 322 IPR004000 -
Lele08g0786 335 ProSitePatterns Actins signature 1. 10 20 IPR004001 -
Lele08g0786 335 Gene3D - 2 312 - -
Lele08g0786 335 PRINTS Actin signature 6 17 IPR004000 -
Lele08g0786 335 PRINTS Actin signature 72 85 IPR004000 -
Lele08g0786 335 PRINTS Actin signature 97 116 IPR004000 -
Lele08g0786 335 PRINTS Actin signature 18 40 IPR004000 -
Lele08g0786 335 PRINTS Actin signature 193 209 IPR004000 -
Lele08g0786 335 ProSitePatterns Actins and actin-related proteins signature. 61 73 IPR020902 -
Lele08g0786 335 SUPERFAMILY Actin-like ATPase domain 104 312 IPR043129 -
Lele08g0786 335 Gene3D Actin; Chain A, domain 4 137 228 - -
Lele08g0786 335 FunFam Actin, muscle 137 228 - -
Lele08g0786 335 FunFam Major actin 215 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0786 Lele-ChrLele08 4914971 4916234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0786 1 312 Cytoskeleton Gene Families AT5G09810 96.474 0.0 629