Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0778 ATGGAACAACGAAGAGAATACGCATATCAGAAAAGAAACACCATTCCATGTAAATCAACCAACAACATTAGACCACAGGCATTCTTTCATGATCTTCGTAAATTCCTAATCAACGATTTGGGACGCTTGGTGGTGCTTTCTTCAGACTGCTCTCCGCAGCTTTCCTGGGCTGTTCCTTGCTTCCGCTTAATTTGCCTATACTTGTTGCCATCAAAGCCAGAGATGATGATAATCACTTCCTCGACAGACCCCTGCCTCCCGAAAATCTTTGTTGTTCATGGTGAATGCAAAATGAAGAGAACCCGGAAAGTGAAGCAGAATCAAGGCCAACACAAGAGACGAAACTCTATAGCTGATAATCTTCATCGCACTAGGTTCAATTGCCGTTACCGTCATATTGATGATGAAAAAGGAGGGGATCTGGCTGTTGCAAAAAAATCAAAGGATATTCTTACTTTTGTCATAATTCTGAGAGCTAGCTGTATTTCTGGTGATGCAATATCTGCTGTAGATTCTGTCCCACATTTCAGAATGTACATTGACATGGAGGCTCAAATTCACCAACTTGAGCAAGAAGCATACTCATCTGTCTTGCGTGCTTTCAAAGCTCAGTCTGATGCTCTTACTTGGGAGAAGGAAGGCTTGATAACTGAGCTCAGGAAAGAGTTAAGGGTTTCGGATGATGAACACAGAGAGCTTCTTACAAGGGTAAATGCTGATGAAATTATCCACCGGATACGGGAGTGGAGGCAAACTGGTACTTACCAACCTTCAATGCGCAGCAGTTCTCAACCTGTTCAGGATGTTTTACCGAGTCCAACTGTTTCTGCTTCTCGTAAGAAACAGAAGACATCCCAACCGGTCCAGTCATTACCTGGTCTGTCTTCAGTGAAGTCTGTGCAGTATCCTTCTGGGGCAGCTGGAGGTAGGCATTTGTCAAGTCGCAGTTCTTTTAATGCCCGCTCATCTAATGCGCCTGCTGAAGCAGCAGCTTCTGATCCATTGATCGGGAAGAAAGTTTGGACTAGATGGCCTGAAGACAATCATTTTTACGAGGCTGTCATAACTGATTACAACCCTACAGAGGGCCGTCATGCATTGGTTTATGACATTAACACATCAAGTGAAACCTGGGAATGGGTTGATCTCAAGGAGATATCACCTGAGGACATACGATGGGATGGAGATCCAGGCATACCCCATAGAGGTGGTCCTGGTAGGCAAGGCCATGGGGTTAAGAAATCTTTTAGCCGCGGCATTGATACTCTGGGTACTGGAAGAGGGAGAGGACATCCAAAGGTTCAGCCCGGAAAAGAATTTCACCCACCGCAAAATGGTATCGTGAAAAGAGTATTGGATGAATTTGAGTTGCTGAATACAGATTTACTGGTCAAAGAGGTGGAAAGGGTTTTTGCTGTGAATCACCCAGATCCTATGGAACTTGAGAAAGCTAAAAATAGGCTGAAAGAGCATGAGCAGGCACTTGTTGGTGCTATCGCCAGACTTGTAGATGCATCTCATGGTGAAAGTGATGGAGAACATCCACTTTTGGATGGGCAGTTAATGGAGACGGGGTCAGTGAAATATGAAGAGGGCACTAGCAAGGTTGGTTCTGAAGCGCCCGGGACACCCCCCGCCTCTGCTTCTCAAAGCAGCGAAGAATGTATATATCTTCGTTCTCGCTACCAGTCCGTGAAGAACCTTATTCACGATGAAAGCGAAGACATAACAAGGCCTAACTCTGAGAAGTTTAATTTGATCTTTAGAGGTGTGGAGAGGTTACATGAACGAGTTGGAAAACCCAGAGAACAAGTGGCTGATGCAAAAGCTCTTCTGGACATCACGGAGTGCTTGGTATCGTCTGTGAAAGCTCACATCAATGATGGATTAACTGCTTCGGACTTTATCTCTCATCTCCTTAACGAATTTGGAAAACAATGTGAATCAAAGACAAGCGCTCAGGACTGCAGGAACTCAATACTTTGGAAGGATCTTGGACTTACTGTATCAGGTGTTTTCAGAAGAGTTGCTGGGTGCTGCACCATGATTGGCCCCATGGACACTGAAATAAATCAGAGGAAGACTATTAATCGAAGAAAGCGAATGAGACCCACTCAAATTGATCGGCCAGAAGAGCTTGATGGTTGTTCGAGGGAAAAGATAGTTGGTACTGATGAAAACATGGCAACCATGTTTAATATCTTGAGGGAAAACAGAGTTGTTAGGCTTGAAAATTTGGTATTGAACAGGAACTCTTTTGCTCAGACGGTGGAGAATTTATTTGCTCTTTCGTTTTTAGTCAAAGATGGAAGGGCCGAAATAAAAGTGAATGAGAAGGGATGGCAACTAGTCTCACCAAGAAACGCTCCTGCTGCAGACGCAATTCTTTCTGGTGAAGTTTTGCACAGCCACTTTGTCTTCAGATTTGACTTTAAAGATTGGGAGCTGATGGCTCGCTCTGTTGGGATTGGTGAGGAGATGATGCCACACAGGAATAGCAAATCTCCATCTGATGAAATTAGCAACAGAAAGCCAAGTGTTACTTGA 2547 0.4429 MEQRREYAYQKRNTIPCKSTNNIRPQAFFHDLRKFLINDLGRLVVLSSDCSPQLSWAVPCFRLICLYLLPSKPEMMIITSSTDPCLPKIFVVHGECKMKRTRKVKQNQGQHKRRNSIADNLHRTRFNCRYRHIDDEKGGDLAVAKKSKDILTFVIILRASCISGDAISAVDSVPHFRMYIDMEAQIHQLEQEAYSSVLRAFKAQSDALTWEKEGLITELRKELRVSDDEHRELLTRVNADEIIHRIREWRQTGTYQPSMRSSSQPVQDVLPSPTVSASRKKQKTSQPVQSLPGLSSVKSVQYPSGAAGGRHLSSRSSFNARSSNAPAEAAASDPLIGKKVWTRWPEDNHFYEAVITDYNPTEGRHALVYDINTSSETWEWVDLKEISPEDIRWDGDPGIPHRGGPGRQGHGVKKSFSRGIDTLGTGRGRGHPKVQPGKEFHPPQNGIVKRVLDEFELLNTDLLVKEVERVFAVNHPDPMELEKAKNRLKEHEQALVGAIARLVDASHGESDGEHPLLDGQLMETGSVKYEEGTSKVGSEAPGTPPASASQSSEECIYLRSRYQSVKNLIHDESEDITRPNSEKFNLIFRGVERLHERVGKPREQVADAKALLDITECLVSSVKAHINDGLTASDFISHLLNEFGKQCESKTSAQDCRNSILWKDLGLTVSGVFRRVAGCCTMIGPMDTEINQRKTINRRKRMRPTQIDRPEELDGCSREKIVGTDENMATMFNILRENRVVRLENLVLNRNSFAQTVENLFALSFLVKDGRAEIKVNEKGWQLVSPRNAPAADAILSGEVLHSHFVFRFDFKDWELMARSVGIGEEMMPHRNSKSPSDEISNRKPSVT 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0778 848 SUPERFAMILY Tudor/PWWP/MBT 334 373 - -
Lele08g0778 848 Coils Coil 481 501 - -
Lele08g0778 848 Gene3D ENT domain 179 292 IPR036142 -
Lele08g0778 848 SMART agenet_At_2 332 391 IPR014002 -
Lele08g0778 848 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 182 269 IPR005491 -
Lele08g0778 848 MobiDBLite consensus disorder prediction 310 326 - -
Lele08g0778 848 Pfam ENT domain 184 251 IPR005491 -
Lele08g0778 848 SMART ENT_2 182 255 IPR005491 -
Lele08g0778 848 Pfam Nse4 C-terminal 741 828 IPR014854 -
Lele08g0778 848 MobiDBLite consensus disorder prediction 253 302 - -
Lele08g0778 848 MobiDBLite consensus disorder prediction 391 442 - -
Lele08g0778 848 PANTHER PROTEIN EMSY-LIKE 4 168 511 IPR033485 GO:0050832
Lele08g0778 848 MobiDBLite consensus disorder prediction 530 552 - -
Lele08g0778 848 MobiDBLite consensus disorder prediction 253 332 - -
Lele08g0778 848 MobiDBLite consensus disorder prediction 827 848 - -
Lele08g0778 848 SUPERFAMILY ENT-like 177 290 IPR036142 -
Lele08g0778 848 Gene3D - 333 388 - -
Lele08g0778 848 FunFam Protein EMSY-LIKE 4 178 308 - -
Lele08g0778 848 FunFam Protein EMSY-LIKE 3 334 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0778 Lele-ChrLele08 4862192 4872387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0778 558 833 Non-SMC Element family AT1G51130 51.087 3.13e-91 292