Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0770 ATGTTTCTAGTTCTCCCTGCCATTCAACAATTTGCGTGGCTCCAAATAACTTCGGTTGCTCGTTTCCATTTGATTTCAAATATAGGCATGAATTTATTCTTTCACTTTTTCGCAGAGGAAGTCATGGACCCTTCTGAACTTAGGTACTTGGAGGATGAGGATACACCAACAATGAAAACTGTCAAGGGCGCAACAACTGGTTTGGTTGCTGGCACCATCTGGGGGACCATAGGTGCGACCTGGTATGATGTTCCCCGTGTTGAGAGGAATGTTGCTCTTCCTGGTCTTTTAAGAACTTTAAAGATGATGGGAAACTACGGGATGACATTTGCTGCAATTGGAGGAGTCTACATCGGTGTGGAGCAATTAGTGCAGAAGTATAGGATGAAGAGAGACTTCGTGAATGGGGCTGTTGGTGGCTTTGTGGCTGGGGCAACTATTCTGGGTTACAAAGGAAGGAGCATCTCAACTGCAATTTCTGCCGGAGCTGCATTAGCAGTCACTTCTTCAATTATTGATATCGGTGGTCAAACGACAAGAATTGACAATGGGAAGGAGTACTATCCTTACACCACCAAGAAAAGAACTAGTAACGGCGTTAGCGGTTCCCGAAGAGGCGAGAGCTTAGCTGAATCAAGTTATCGACTAACAAGATACAGAGATTACGGAGAAATCTTACAATGGCGGGAATTGGTTTATGCTCCAGTCTTTCTTCCTCCAGGTTGTGTTTTCAGCAATTTAGGGACATCTTGGTTGGTATTAAAATCTCACAATGCAAGGACCATGCCAGGGAAACTTCCTGGAAGGACAAGCTTGACAATAAAAGCTGAAGTGAAGTATGTAAATGCGGATGAAGCAAAAGAACTTATAGCAGTCGAAGGATACACAGTTCTGGATGTGAGGGATAAAACCCAGTTCGAACGGGCTCACGTAAAATCATGTTATCACGTGCCTCTTTTTATTGAAAATCAAGACAATGATCTTGGTACAATTATAAAAAGGACCGTGCACAATAACTTTTCTGGGTTGTTCTTTGGGTTGCCATTCACTAAATTAAACCCTGATTTTGTGCAATCTGTTGAGAGTCAGCTTTCCCCTGAAAGTAAACTCTTGGTTGTATGCCAGGAGGGATTGAGATCTGCTGCTGCAGCAAATAGATTAGAACAATCTGGTTTCTCAAATATAGCATGCATTACATCAGGCCTTCAGACTGTGAAGCCAGGGACATTTGATTCTGTTGGTTCCACTGAGTTGCAGAATGCTGGAAAAGCTGGTTTGGTGACGATCCAAGGAAAAATCTCAGCTGTTTTGGGAACTGTTCTTGTTTGTGCGTATCTGTTCATTACCTTCTTCCCTGATCAAGCAGAGAAGTTATTCCAACTGGCGCCTGTAGGCTAG 1398 0.4328 MFLVLPAIQQFAWLQITSVARFHLISNIGMNLFFHFFAEEVMDPSELRYLEDEDTPTMKTVKGATTGLVAGTIWGTIGATWYDVPRVERNVALPGLLRTLKMMGNYGMTFAAIGGVYIGVEQLVQKYRMKRDFVNGAVGGFVAGATILGYKGRSISTAISAGAALAVTSSIIDIGGQTTRIDNGKEYYPYTTKKRTSNGVSGSRRGESLAESSYRLTRYRDYGEILQWRELVYAPVFLPPGCVFSNLGTSWLVLKSHNARTMPGKLPGRTSLTIKAEVKYVNADEAKELIAVEGYTVLDVRDKTQFERAHVKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKLNPDFVQSVESQLSPESKLLVVCQEGLRSAAAANRLEQSGFSNIACITSGLQTVKPGTFDSVGSTELQNAGKAGLVTIQGKISAVLGTVLVCAYLFITFFPDQAEKLFQLAPVG 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0770 465 ProSiteProfiles Rhodanese domain profile. 291 414 IPR001763 -
Lele08g0770 465 Pfam Rhodanese-like domain 283 403 IPR001763 -
Lele08g0770 465 CDD RHOD 285 406 - -
Lele08g0770 465 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 275 403 IPR036873 -
Lele08g0770 465 SMART rhod_4 281 411 IPR001763 -
Lele08g0770 465 Gene3D - 269 410 IPR036873 -
Lele08g0770 465 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 243 463 IPR044615 -
Lele08g0770 465 FunFam Rhodanese-like domain-containing protein 9, chloroplastic 268 410 - -
Lele08g0770 465 Pfam Tim17/Tim22/Tim23/Pmp24 family 59 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0770 Lele-ChrLele08 4813401 4817991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0770 245 459 Sulfurtransferasese or Rhodanese AT2G42220 74.419 5.58e-116 338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0770 08 4813401 4817991 Lele08g0770 08 4813401 4817991 ECH
Lele05g0913 05 5629556 5631254 Lele08g0770 08 4813401 4817991 hybridization