Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0768 ATGAAGTTGTCTAACTCGCAAAACGAAACCGCCGCCGCCGCTAATCAATCATCCAAAGCTGTCAAGCGAGAGAGCACTCGCAAGGGCCTAACCTCAAGTTCTGAACAGGAAGGGCCTAAAACACCTGATCCTAAGACGCTCAGAAGACTAGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGAAAAAAGGCATATGTGCAGCAGCTAGAGTCAAGTAGGATCAGACTGAATCAGCTGGAACAAGACTTGCAGCGTGCTAGAGCTCAAGGCATATTCTTTGGAGGAGGATCTGGTGCAGTTTTGGGAGGAGAGCAAGGCCTTCTTGTCTCCATGAGTACCATTAGCTCAGATGCTGCAATGTTCGACGTGGAATACGGGAGATGGGTGGAGGAGCACCACCGGCTAGTGTGCGAGCTGAGAGCGGCGGTTCAAGAGCACCTGCCGGAGAACGAGCTGAGGCTATTTGTGGACAACTGCCTCGCTCATTATGACCAAGTTATGAACCTCAAGAGCATCATAGCTAAAACTGACGTCTTCCACCTCGTCTCCGGCATGTGGAAGACTCCGGCCGAGCGTTGCTTCATGTGGATCGGCGGATTCAGGCCCTCTGAACTCATTAAGATAATTCTAAATCAAATAGAGCCGCTGACGGAGCAACAAATACTTGGGATCTGTGGGTTGCAGCAATCTACACAAGAGGCAGAAGATGCTCTCTCACAAGGTCTCGAAGCTCTGAACCAATCTCTCTCGGAAACCATAACCTCAGACTCATTGAGCTCTACCCCTAATATGGCCAACTACATGGGACAAATGGCCCTGGCCATGAATAAGCTCTCCACACTCGAAGGTTTCGTCCGACAGATAAATTGTGAATATATTGAAAATGAGAAACTTACAGGCGGATGGTCTGCGGCACCAAACGATTCACCGTCTGTATCAGATCCTAACGACGCGTCAGGCGGCGAGGTGTTTGCTGGCCATGGCGGAGTACTCTTATCGTCTGAGAGCCCTCAGCTCTCTGTGGGTGGCTCGCCCTCGCCAGGAATAACCCAGTATCTTTAA 1068 0.5047 MKLSNSQNETAAAANQSSKAVKRESTRKGLTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQDLQRARAQGIFFGGGSGAVLGGEQGLLVSMSTISSDAAMFDVEYGRWVEEHHRLVCELRAAVQEHLPENELRLFVDNCLAHYDQVMNLKSIIAKTDVFHLVSGMWKTPAERCFMWIGGFRPSELIKIILNQIEPLTEQQILGICGLQQSTQEAEDALSQGLEALNQSLSETITSDSLSSTPNMANYMGQMALAMNKLSTLEGFVRQINCEYIENEKLTGGWSAAPNDSPSVSDPNDASGGEVFAGHGGVLLSSESPQLSVGGSPSPGITQYL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0768 355 CDD bZIP_HBP1b-like 45 94 - -
Lele08g0768 355 Pfam Seed dormancy control 138 212 IPR025422 GO:0006351|GO:0043565
Lele08g0768 355 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 43 87 IPR004827 GO:0003700|GO:0006355
Lele08g0768 355 Pfam bZIP transcription factor 45 81 IPR004827 GO:0003700|GO:0006355
Lele08g0768 355 ProSiteProfiles DOG1 domain profile. 120 355 IPR025422 GO:0006351|GO:0043565
Lele08g0768 355 FunFam BZIP family transcription factor 44 93 - -
Lele08g0768 355 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 48 63 IPR004827 GO:0003700|GO:0006355
Lele08g0768 355 MobiDBLite consensus disorder prediction 1 20 - -
Lele08g0768 355 PANTHER TRANSCRIPTION FACTOR TGA9 15 289 - -
Lele08g0768 355 SUPERFAMILY Leucine zipper domain 45 86 IPR046347 GO:0003700|GO:0006355
Lele08g0768 355 MobiDBLite consensus disorder prediction 304 318 - -
Lele08g0768 355 MobiDBLite consensus disorder prediction 336 355 - -
Lele08g0768 355 MobiDBLite consensus disorder prediction 302 329 - -
Lele08g0768 355 MobiDBLite consensus disorder prediction 1 48 - -
Lele08g0768 355 SMART brlzneu 41 116 IPR004827 GO:0003700|GO:0006355
Lele08g0768 355 Coils Coil 64 91 - -
Lele08g0768 355 Gene3D - 44 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0768 Lele-ChrLele08 4791013 4795528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0768 16 291 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 68.310 5.11e-138 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele08g0768 DOG1 1.4e-31 No_clan