Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0760 ATGCATCTTCCTCTCCACGTAGCTTCCATTCTCCTCCTCTTCTTGGCTTCTTTCACCTCCTCATTGAACTCCGATGGTCTCTCCCTACTCGCCCTCAAAGCCGCCATCGAGTCCGACACTTCCGGAGTTCTCAACTCGTGGTCCGACTCTGACTCCACCCCATGTCGCTGGGCTGGGGTCGCCTGTGCCCATGACCGAGTCACCCAACTCGTCCTCCCCAACAAAGGCCTCACCGGTTACATCCCATCGGAACTCGGTTTGCTCGACTCGCTCAGGCAACTCAGTATTTCGCACAATAACTTCTCCAATGCCATTCCTTCCCGTCTGTTCAACGCGACCAGCCTCGTCGTTTTAGACCTCTCTCATAATCTCCTCTCTGGTCCCATTCCAACTGAGATCAGGTATCTCAAATCCCTCAGACATTTGGATTTATCCTCAAATTCCCTTAATGGCTCTCTCCCTGAAGCACTATCCAAGTTCACTAACCTCGTTGGGAACTTGAATCTCTCTTACAATCACTTCTACGGTGGGATCCCGGAGTCTTTGGGGCAACTCCCTGTGATAGTCAGTTTGGATCTCCAGAACAACAATCTGACCGGCAAAATCCCTCAAGTTGGTTCGTTGCTAAACCAGGGTCCTACAGCTTTCTCCGGCAACCCTGGGCTCTGTGGGTTCCCTTTGCAGAACGCATGCCCAGAAGCTCAGAATCCCGAGAATTACCCAGGCACAGAAGACCCTGAAAACCCAAAAACCGTTAACCCTGGCTTTCCAACGGGGTTTCAAGAAGCAAAGGCGAAAGAGCGAGGTCGTTCCGTCATTGTCCCTATAATTTTCGGCATCTCTTTGGTAGCAGGGGCCGTTTCGTTGTCAGTTTGGCTGTTGCGCAGACGACGGACGGTTGATTTGAACAGGTTAGGGAAGCAAAAATTAGACAATGAGGCCGATGAGCAAGGAGGTGAAGGGCAAAAGGGTAAATTCATGATCGTGGACGAAGGGTTCAATCTGGAACTAGAGGATTTATTAAGGGCATCCGCATATGTGGTGGGGAAAAGTAAGAGTGGGATCGTATACAAGGTAGTGGCTGCTGGGAAAGGGTCGGGCCCGGCGGCGACTGTGGTGGCCGTCCGGCGGTTGAGTGAGGGTGATGCCACGTGGAAGCTCAAGGAGTTCGAGGTTGAAGTGGAGACCATTGGGAGGGTCAACCACCCTAACATCGTCCGCTTAAGAGCGTATTACTATGCAAGTGACGAAAAATTAATTATCACTGATTTCATCCGTAATGGAAGCTTGCACACTGTACTTCATGGTGGACCTTCCAATCCTTTGCCGGCATTAACATGGGAAGCGAAGTTAAAGATTGCTCAAGGAGCTGCAAGGGGCTTAATGTACATACACGAGTTCAGTGGTCGAAAATACGTGCATGGCAACCTTAAATCAACAAAAATCTTGCTGGACGATGAACTCCATCCTTTCATATCTGGTTTTGGACTTACTCGTCTCATGTCGAGCTGCTCAAAGTCCACAATAGTGGCACCAAAGCGACAGAATTCAAAGCAGTCTATTGCAACCTCTGCAATGGCAGCTTCCCAAAACAACTACTTGGCACCAGAGGTGCGCATGAGCGGAGGCAAATATACTCAGAAATGTGATGTGTATTCTTTTGGGATAGTGCTGTTGGAACTATTGACAGGACGGAGGCCAGAGAATGAGGGGGAAGTACTAGAGAGTTTTGTGAGACAGGCATTCAGGGAAGAGAAACCCTTGTGCGAGATAATTGACCCTGCACTTCTGTCTGAGGTGTATGCTAAGAAGCAAGTAGTTGCAGCATTTCATCTTGCACTCAACTGCACAGAACACGACGCAGAGATGCGACCGAGAATGAGAACCGTGTCGGAGAGCCTCGATCGCATCAAGTCACCGTGA 1923 0.4992 MHLPLHVASILLLFLASFTSSLNSDGLSLLALKAAIESDTSGVLNSWSDSDSTPCRWAGVACAHDRVTQLVLPNKGLTGYIPSELGLLDSLRQLSISHNNFSNAIPSRLFNATSLVVLDLSHNLLSGPIPTEIRYLKSLRHLDLSSNSLNGSLPEALSKFTNLVGNLNLSYNHFYGGIPESLGQLPVIVSLDLQNNNLTGKIPQVGSLLNQGPTAFSGNPGLCGFPLQNACPEAQNPENYPGTEDPENPKTVNPGFPTGFQEAKAKERGRSVIVPIIFGISLVAGAVSLSVWLLRRRRTVDLNRLGKQKLDNEADEQGGEGQKGKFMIVDEGFNLELEDLLRASAYVVGKSKSGIVYKVVAAGKGSGPAATVVAVRRLSEGDATWKLKEFEVEVETIGRVNHPNIVRLRAYYYASDEKLIITDFIRNGSLHTVLHGGPSNPLPALTWEAKLKIAQGAARGLMYIHEFSGRKYVHGNLKSTKILLDDELHPFISGFGLTRLMSSCSKSTIVAPKRQNSKQSIATSAMAASQNNYLAPEVRMSGGKYTQKCDVYSFGIVLLELLTGRRPENEGEVLESFVRQAFREEKPLCEIIDPALLSEVYAKKQVVAAFHLALNCTEHDAEMRPRMRTVSESLDRIKSP 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0760 640 Gene3D Transferase(Phosphotransferase) domain 1 425 640 - -
Lele08g0760 640 SMART LRR_typ_2 88 112 IPR003591 -
Lele08g0760 640 SMART LRR_typ_2 136 159 IPR003591 -
Lele08g0760 640 Gene3D Phosphorylase Kinase; domain 1 322 424 - -
Lele08g0760 640 Gene3D Ribonuclease Inhibitor 164 229 IPR032675 -
Lele08g0760 640 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Lele08g0760 640 ProSiteProfiles Protein kinase domain profile. 342 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0760 640 FunFam Leucine-rich repeat receptor-like protein kinase 138 233 - -
Lele08g0760 640 Pfam Protein tyrosine and serine/threonine kinase 348 634 IPR001245 GO:0004672|GO:0006468
Lele08g0760 640 Gene3D Ribonuclease Inhibitor 21 163 IPR032675 -
Lele08g0760 640 PRINTS Leucine-rich repeat signature 115 128 - -
Lele08g0760 640 PRINTS Leucine-rich repeat signature 136 149 - -
Lele08g0760 640 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 638 - -
Lele08g0760 640 Pfam Leucine rich repeat 90 149 IPR001611 GO:0005515
Lele08g0760 640 SUPERFAMILY L domain-like 24 228 - -
Lele08g0760 640 SUPERFAMILY Protein kinase-like (PK-like) 347 634 IPR011009 -
Lele08g0760 640 FunFam Leucine-rich repeat receptor-like kinase 27 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0760 Lele-ChrLele08 4737548 4740500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0760 22 639 Receptor kinase-like Gene Family AT3G57830 61.180 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele08g0760 PK_Tyr_Ser-Thr 3.2e-30 CL0016