Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0754 ATGTGTTCAAAGTGTTACAAGGACACACTGTTGAAGCAGGAACAGGCAAAAATTGCTGCATCATCAGTTGAAAGTATCGTGAATGGCAGCTCTAGCAGGAATGGCGAAGAGGTTGTGAATATAATTGCTACAGATGTACAGGTTGGAACAATGGAAGTCAAGCCAGTTGGTGCTAAACTTTCTGAGAATTCATCCCCTAGTGAGGCTTCAGAGGTGAAAGCCAAGACAGGCCCCAGCAGATGTGCCACTTGCCAGAAGCGAGTTGGATTAACTGGTTTCAGCTGTAAATGTGGCAACCTGTTTTGTGCAACGCACCGCTACTCTGACAAACATGACTGCCCTTTTGATTATCGGACAGTTGGTCAGGATGCTATAGCTAAAGCCAATCCTGTAATCAAGGCAGAAAAGCTTGACAAAATCTAG 423 0.4492 MCSKCYKDTLLKQEQAKIAASSVESIVNGSSSRNGEEVVNIIATDVQVGTMEVKPVGAKLSENSSPSEASEVKAKTGPSRCATCQKRVGLTGFSCKCGNLFCATHRYSDKHDCPFDYRTVGQDAIAKANPVIKAEKLDKI 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0754 140 Gene3D - 56 136 IPR035896 -
Lele08g0754 140 SMART AN1_Zf_4 81 118 IPR000058 GO:0008270
Lele08g0754 140 Gene3D - 1 32 - -
Lele08g0754 140 FunFam Zinc finger AN1-type containing 6 57 136 - -
Lele08g0754 140 Pfam AN1-like Zinc finger 81 117 IPR000058 GO:0008270
Lele08g0754 140 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 140 - -
Lele08g0754 140 ProSiteProfiles Zinc finger AN1-type profile. 75 121 IPR000058 GO:0008270
Lele08g0754 140 SUPERFAMILY AN1-like Zinc finger 64 135 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0754 Lele-ChrLele08 4711743 4712165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0754 70 140 C2H2 Transcription Factor Family AT3G52800 53.521 2.54e-26 95.5