Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0709 ATGGTATCATCGTCTGATGAAGGAATTGTAGGGTTTGCAACGATGGGCACTGCGTGGAGGCAATTAAAGGTTATGCTATGGAAGAATTGGCTTCTCAAAATTCGTCATCCCTTTGCAACAAGTGCTGAGGTTTTGCTCCCAACTTTAGTGATGTTGCTGTTAATAGCTGTAAGGACTCGGGTTGATACACAAATTCATCCCGCGCAACCGCATATCCGAGATGGGATGTATGTAGAAGTGGGCAGGGGTATTTCTCCTAGCTTCCAACAAGTTTTGGAAGTTTTGTTGGCCAAGAAAGAGTATATAGCCTTTGCCCCTAATACAACAGAGACTGAGCAAATGATAGACATAATGTCAATAAAATTTCCCCTCTTGAAGCGTGTCAGTAAAATATACAAAGATGAGGCAGAGCTGGAGACTTACATACGCTCAGATGTTTATGGTACCTGCAATCAAGCAAGGAATTGTTTATATCCAAAAATCAAAGGAGCAGTGGTATTTCATGAACAAGGTCCTAATTCATTTGATTACAGCATACGCCTCAATCATACATGGGCTTTCTCTGGTTTTCCTGATGTTAAAACCATAATGGACACAAATGGCCCTTTTGTCCGTGACTTGGAACTTGGTGTTAGTGCAATACCAACAATGCAGTACAGCTTCAGTGGGTTTTTAACTCTCCAGCAAGTTGTTGATTCGTTTATAATATTCATGGCTCAGCAGTCTGACATAACCCCTAGCACTGAAAGTGTAGAGCATGCTCTGCCACGCTCCTATGATACTGATTTTTCTTTGAAAATTCCTTGGACTCAGTTTAGTCCTGCTCACATACGAATGGCTCCATTTCCCACTCGAGAGTACACTGATGATCAGTTCCAGTCAATTGTGAAGAATTTCATGGGGATTTTGTACTTATTGGGATTTCTGTATCCAATTTCTCGACTGATCAGTTATTCTGTGTTTGAGAAGGAACAGAAAATTAAGGAAGGGCTCTACATGATGGGCCTGAAAGATGGTGTGTTCCATCTCTCATGGTTTATAACATATGCTTTGCAGTTTGCAATCTCTTCTGGAATCATCACAGCTTGCACAATGGACAATTTATTCAAGTATAGCGATAAGACACTGGTGTTTGCATACTTTTTCCTTTTTGGGCTTAGTGCAATTATGTTGTCATTTTTTATATCAACATTTTTCAAGCGGGCTAAAACAGCTGTAGCAGTTGGAACCCTTTCTTTCCTTGGCGCCTTTTTCCCTTATTACACTGTGTATGACGAGGCAGTGTCTATTGTCTTAAAGATTATTGCTTCTTTGCTTTCACCTACGGCTTTTGCTCTGGGGTCTATCAACTTTGCTGATTACGAGCGTGCTCATGTTGGACTTCGTTGGAGCAACATGTGGCGGGATTCATCTGGAGTAAACTTTTTGTTCTGTTTTCTGATGCTGCTGCTTGATACACTGCTGTATTGTGCGATTGGTCTTTATCTTGATAAGGTTCTTCCAAGGGAGTATGGATCACAGTATTCATGGAACTTTATTTTCCAAAAAAACTTTTGGAGGAAGAAACAAACTGTAAACCATTGTTCCTCCAGTTTAGACATAGAAATTTCTGATAAGATTTCCAAGTCAAAGGGAATTTTCGTCGCGGAAAATGCTTTCAAACCTGCTATAGAAGCAATAAGTTTGGACATGAAACAACAAGAGCTTGATGGCAGGTGCATTAAAATTAGGGATTTGCATAAAGTGTATGCTTCTAAAAAGGGGGCTTGCTGTGCTGTTAACTCATTACGGCTTACTTTGTATGAAAATCAAATTCTTGCTCTTCTAGGGCACAATGGAGCTGGAAAATCCACGACAATCTCAATGCTCGTTGGTCTTCTTACTCCTACTTCAGGGGATGCTTTGGTGTTTGGAAAGAATATTTTAACTGATATTGATGAGATACGGAAGGTTTTGGGTGTCTGCCCCCAAAATGACATACTTTTTCCAGAATTGACTGTGAGAGAGCATCTAGAAATATTTGCGGTATTAAAGGGTGTGGAGGAAGACTCTTTGAAGGATGTTGTTTCTAATATGGTAGATGAGGTGGGTTTAGCTGATAAAATTAACACTCTAGTAGGAGCTCTTTCTGGTGGCATGAAGAGGAAGCTGTCTCTTGGAATTGCATTGATAGGAAACAGCAAGGTTATAGTTCTTGATGAGCCTACTAGTGGAATGGATCCATACTCAATGCGCTTGACTTGGCAGTTAATTAAAAAAATAAGAAAAGGAAGGATAATATTACTGACAACGCACTCTATGGATGAAGCAGACGAACTAGGTGATCGGATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGTTCCCTTTTCTTGAAGCACCACTATGGTGTTGGTTATACTTTAACTCTTGTGAAGTCTGCACCCACTGCTTCAGTAGCTTCTGATATTGTCAAACGCCATGTTCCGTCAGCTACTTGTGTGAGTGAGGTGGGAACTGAGATTTCCTTCAGGCTTCCTCTTCTGTCCTCATCAGCCTTTGAGAGCATGTTCAGGGAAATTGAAAGTTGCTTGAGAAAATCAGTTTCTAACTTGGAATCCACTGATCATGATGGAAAAGAGAGTCTTGGTATTGAAAGCTATGGTATATCTGTCACAACCCTAGAGGAGGTATTCCTGCGAGTTGCAGGATCAGACTATGATGAAGTTGAATGTTTTGAGGAGAAAAAGTGCCCCTTTATGTCAGATTCCTCGCCTTCTCATGCTTCTTATGATCATCCATCCAAAAACAGATGGCTTTTTGAATTTCTTGGAAACTACAGGAAGATTATTGGATTCTTATCTAGCACAGTGGCAAGAGCTTGTTATTTATTCTTTGCTACAGTGTCAAGTCTCGTAAACTTCTTGAGTATGCTGTGTTGTAGCTGCTGTGTCATTACCAGGTCCACATTTTGTCAGCATTCCAAGGCTTTGTTCATTAAGAGAGCAATATCTGCTCGCAGGGATCACAAAACTATTGTTTTCCAGCTTCTGATTCCTGCTGTCTTCTTATTTATTGGCCTTCTGTTTCTCAAGCTTAAGCCACACCCTGATCAGCAGTCCTTGACCCTTACAACATCTTATTTTAATCCTTTGCTGAGCGGAGGTGGCGGGGGAGGTCCAATTCCTTTTAATTTTTCTTTTCCAATTACCAAAGAGGTAGCCAATTATGTCAAAGGAGGGTGGATTCAAAGGGTCAAACCAACCGTGTACAAATTCCCTAACCCAGAAAAGGCATTAGATGAAGCAGTGGAAGTAGCAGGGCCAATTCTTGGACCTGCTTTACTTTCTATGAGTGAATATTTGATGTCTAGCTTTAATGAATCCTACCAGTCTAGGTATGGAGCAATTTTAATGGATGAACAGTACAATGATGGGAGTTTAGGCTACACTGTTCTACACAACTGTTCTTGTCAGCATTCTGGTCCAACCTTTATCAATTTGATGAATGCTGCAATTCTTAGGCTTGCTACTCATGACATGAATATGACAATTCGGACACGTAACCACCCTCTACCAATGACACAAAGCCAGCTCTTACAACGTCATGATCTGGATGCTTTTTCTGCCGCAATTATTGTCAATATTGCCTTCTCTTTTATACCGGCCTCATTTGCTGTTTCCATTGTAAAGGAACGGGAAGTTAAAGCAAAGCACCAACAACTAATCAGTGGGGTTTCTATTTTTTCATACTGGGCTTCTACATTTATATGGGACTTTGTGAGCTTCTTGTTTCCTACCTCCTTTGCGGTTGTTCTCTTTTACATTTTTGGTCTGGATCAGTTTGTTGGAGGGCCTTCTTTGCTGCCAACTGTCCTCATGCTTTTGGAGTATGGACTGGCAATTGCATCATCAACATACTGTCTTACATTTTTCTTTTCTGACCATACCATGGCTCAGAATGTGGTTCTCCTTGTCCACTTCTTCACTGGCCTAGTACTAATGGTTATTTCATTCATTATGGGACTGATACCATCAACAACAAGCGCCAATTCTTTTCTTAAGAACTTCTTCAGAATATCTCCTGGATTTTGTTTTGCTGATGGGTTTGCTTCACTAGCTCTCCTACGGCAAGGGATGAAAGATAAAACAAGTGATGGGGTGCTTGATTGGAATGTTACCGGTGCTTCTATCTGTTATCTTGCTCTTGAGAGCCTTTGTTACTTTGTGTTAACACTTGGAATTGAAGTTTTTCCTTCTCTCAAATTGACTCTGTTCATGATCAAAAAGTGGTGGGAAAATACCATCCCACGTAATACTCCTCCTTATCAGGAAAAGCTATTAGAACCTTCCCTGGAAACTGTTGGTATGGACTTTGATGAAGATGTAGATGTGAAAACAGAAAGAAACAGAGTACTGTCAGGTTCTCTTGACAATGCCATCATCTATTTGTGTAATCTTCGTAAGGTCTATTATGAAGGGAAGCTTCACCAGCAAAAGGTTGCAGTAGATTCATTAACCTTCGCAGTTCAGGAAGGAGAATGCTTTGGCTTTTTAGGGACAAATGGAGCTGGAAAGACCACAACTTTGTCAATGTTGTGTGGAGAAGAATCTCCATCTGATGGGACTGCTTTTATTTTTGGCAAGGATATATGTTCTCATCCCAAGGCTGCTCGGCGGCATATTGGTTATTGCCCACAATTCGATGCTCTATTGGAATATTTGACTGTACAAGAACATCTTGAGCTTTACGCTAGAATAAAGGGTGTTCCAAGTTGCATAATAGATAACGTTGTTTTGGAAAAGTTACAGGAGTTTGACTTGCTGAAGCATGCTAATAAGCCATCATTTTCTCTTAGTGGAGGAAATAAAAGGAAGTTGTCTGTCGCAATTGCCATGATTGGAAATCCTCCTATTGTCATCCTTGATGAGCCATCCACAGGAATGGATCCCATTGCCAAACGTTTCATGTGGGATGTAATATCTAGGATCTCAACGAGACGAGGAAAGACAGCAGTAATTCTGACTACCCACAGCATGAATGAAGCTCAAGCATTGTGTACGCGAATGGGAATAATGGTTGGTGGCCGATTAAGATGCATCGGAAGTCCACAGCACTTGAAAACAAGATTTGGGAATCATCTGGAATTAGAGGTGAAACCTACTGAAGTGAGCTCTGAGGACTTGGAAATACTCTGTAAAGCTATACAAGAAAGACTTTTTGATGTTCCATCTCATCCGAGAAGCTTACTTGACGGCCTTGAAATTTGCATTGGAGGCGCTGACTCCATTTCATCAGATGCCTCTTTCGCTGAACTTAGCTTGTCACGGGAAATGATTGTCTTCATTGGACGCTGGCTTGGCAATAAAGAAAGAATAAAGATGCTTATCTCTTACACACATGTATCTGATGGGGCTTCTAGTGAACTGTTATCTGAACAACTGTTCCGAGATGGTGGTATTCCATTGCCGGTATTTTCTGAGTGGTGGCTGTCCAAAGAAAAGTTCTCGGCAATAGATGCATTTATTCTATCTTCTTTTCCTGAAGCAAGATGTCAAGGGTGCAATGGTTTGAGTATGAGATACCAGTTACCATATGGTGAAGGCTTTTCTCTTGCGGATGTTTTTGGACTTCTTGAAGGAAACAGAAATAGACTAGGCATTGCAGAGTACAGCATCAGCCAGTCAACTCTGGAGACCATATTTAACCATTTTGCAGCTAACTCATGA 5715 0.4089 MVSSSDEGIVGFATMGTAWRQLKVMLWKNWLLKIRHPFATSAEVLLPTLVMLLLIAVRTRVDTQIHPAQPHIRDGMYVEVGRGISPSFQQVLEVLLAKKEYIAFAPNTTETEQMIDIMSIKFPLLKRVSKIYKDEAELETYIRSDVYGTCNQARNCLYPKIKGAVVFHEQGPNSFDYSIRLNHTWAFSGFPDVKTIMDTNGPFVRDLELGVSAIPTMQYSFSGFLTLQQVVDSFIIFMAQQSDITPSTESVEHALPRSYDTDFSLKIPWTQFSPAHIRMAPFPTREYTDDQFQSIVKNFMGILYLLGFLYPISRLISYSVFEKEQKIKEGLYMMGLKDGVFHLSWFITYALQFAISSGIITACTMDNLFKYSDKTLVFAYFFLFGLSAIMLSFFISTFFKRAKTAVAVGTLSFLGAFFPYYTVYDEAVSIVLKIIASLLSPTAFALGSINFADYERAHVGLRWSNMWRDSSGVNFLFCFLMLLLDTLLYCAIGLYLDKVLPREYGSQYSWNFIFQKNFWRKKQTVNHCSSSLDIEISDKISKSKGIFVAENAFKPAIEAISLDMKQQELDGRCIKIRDLHKVYASKKGACCAVNSLRLTLYENQILALLGHNGAGKSTTISMLVGLLTPTSGDALVFGKNILTDIDEIRKVLGVCPQNDILFPELTVREHLEIFAVLKGVEEDSLKDVVSNMVDEVGLADKINTLVGALSGGMKRKLSLGIALIGNSKVIVLDEPTSGMDPYSMRLTWQLIKKIRKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTASVASDIVKRHVPSATCVSEVGTEISFRLPLLSSSAFESMFREIESCLRKSVSNLESTDHDGKESLGIESYGISVTTLEEVFLRVAGSDYDEVECFEEKKCPFMSDSSPSHASYDHPSKNRWLFEFLGNYRKIIGFLSSTVARACYLFFATVSSLVNFLSMLCCSCCVITRSTFCQHSKALFIKRAISARRDHKTIVFQLLIPAVFLFIGLLFLKLKPHPDQQSLTLTTSYFNPLLSGGGGGGPIPFNFSFPITKEVANYVKGGWIQRVKPTVYKFPNPEKALDEAVEVAGPILGPALLSMSEYLMSSFNESYQSRYGAILMDEQYNDGSLGYTVLHNCSCQHSGPTFINLMNAAILRLATHDMNMTIRTRNHPLPMTQSQLLQRHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKHQQLISGVSIFSYWASTFIWDFVSFLFPTSFAVVLFYIFGLDQFVGGPSLLPTVLMLLEYGLAIASSTYCLTFFFSDHTMAQNVVLLVHFFTGLVLMVISFIMGLIPSTTSANSFLKNFFRISPGFCFADGFASLALLRQGMKDKTSDGVLDWNVTGASICYLALESLCYFVLTLGIEVFPSLKLTLFMIKKWWENTIPRNTPPYQEKLLEPSLETVGMDFDEDVDVKTERNRVLSGSLDNAIIYLCNLRKVYYEGKLHQQKVAVDSLTFAVQEGECFGFLGTNGAGKTTTLSMLCGEESPSDGTAFIFGKDICSHPKAARRHIGYCPQFDALLEYLTVQEHLELYARIKGVPSCIIDNVVLEKLQEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGNPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRMGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPTEVSSEDLEILCKAIQERLFDVPSHPRSLLDGLEICIGGADSISSDASFAELSLSREMIVFIGRWLGNKERIKMLISYTHVSDGASSELLSEQLFRDGGIPLPVFSEWWLSKEKFSAIDAFILSSFPEARCQGCNGLSMRYQLPYGEGFSLADVFGLLEGNRNRLGIAEYSISQSTLETIFNHFAANS 1904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0709 1904 CDD ABC_subfamily_A 574 795 - -
Lele08g0709 1904 Pfam ABC-2 family transporter protein 1006 1408 - -
Lele08g0709 1904 Pfam ABC-2 family transporter protein 261 494 - -
Lele08g0709 1904 SMART AAA_5 602 784 IPR003593 -
Lele08g0709 1904 SMART AAA_5 1507 1694 IPR003593 -
Lele08g0709 1904 Pfam ABC transporter 1499 1641 IPR003439 GO:0005524
Lele08g0709 1904 Gene3D - 561 810 IPR027417 -
Lele08g0709 1904 Gene3D - 1470 1719 IPR027417 -
Lele08g0709 1904 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1125 1414 IPR026082 GO:0016020|GO:0055085|GO:0140359
Lele08g0709 1904 FunFam ABC transporter A family member 1 1466 1720 - -
Lele08g0709 1904 ProSitePatterns ABC transporters family signature. 709 723 IPR017871 GO:0005524|GO:0016887
Lele08g0709 1904 FunFam ATP-binding cassette sub-family A member 12 566 811 - -
Lele08g0709 1904 ProSitePatterns ABC transporters family signature. 1614 1628 IPR017871 GO:0005524|GO:0016887
Lele08g0709 1904 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1476 1706 IPR027417 -
Lele08g0709 1904 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 574 793 IPR027417 -
Lele08g0709 1904 ProSiteProfiles Zinc finger SWIM-type profile. 961 998 IPR007527 GO:0008270
Lele08g0709 1904 CDD ABC_subfamily_A 1477 1703 - -
Lele08g0709 1904 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 574 807 IPR003439 GO:0005524
Lele08g0709 1904 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1477 1715 IPR003439 GO:0005524
Lele08g0709 1904 Pfam ABC transporter 594 737 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0709 Lele-ChrLele08 4350561 4386802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0709 554 840 Calmodulin-binding Proteins AT2G36910 25.333 1.20e-16 84.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0709 08 4350561 4386802 Lele08g0709 08 4350561 4386802 ECH
Lele06g0707 06 4331629 4362742 Lele08g0709 08 4350561 4386802 hybridization