Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0705 ATGCAGAGTGTTTGCAGATTTCTGAAAGTTGGTGGGCTGCTAGTCTTAGCTCCAGAGATTTCATCAATGGGGGACCATTTTCCAGAGGTCGCTGTCATCGTTTTCTCTGGCACCGGCAAGCTTTATGAGTTTTCTAACACAAGCATGGATCACACACTTTCAAGGTATACCAAAGGCGTGGAATTGGATTATACAGAGCAACCTTGTGATGGGCCACCACCTGAGGAGACTCAGCCTGATACAGACCTTCTAAAGGACGAAATAAGAAAGCTTCGTTTAGCATACTTAAGAATGATGGGGAAGGAGCTCGATGGGTTGAAATTTAAAGAGCTACAGAACTTAGAAAATCAACTGAGTGAAGGGATACTATCTGTTAAAGAAAAGAAGGAACAAGTACTTCTAGATCAACTTAGGGGGTCCAGATTACAGCCATGTTGGAGAATGAAGCTCTGCGCAAACAAATTGAGGAGATGCAGAATAAATCAAACACAACACACTTCGTTTATTTCAATACCTTAG 519 0.422 MQSVCRFLKVGGLLVLAPEISSMGDHFPEVAVIVFSGTGKLYEFSNTSMDHTLSRYTKGVELDYTEQPCDGPPPEETQPDTDLLKDEIRKLRLAYLRMMGKELDGLKFKELQNLENQLSEGILSVKEKKEQVLLDQLRGSRLQPCWRMKLCANKLRRCRINQTQHTSFISIP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0705 172 Pfam K-box region 76 139 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele08g0705 172 Coils Coil 111 131 - -
Lele08g0705 172 ProSiteProfiles K-box domain profile. 74 166 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele08g0705 172 SUPERFAMILY SRF-like 12 66 IPR036879 GO:0003677|GO:0046983
Lele08g0705 172 PANTHER SERUM RESPONSE FACTOR HOMOLOG 29 138 - -
Lele08g0705 172 Gene3D - 11 61 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0705 Lele-ChrLele08 4321765 4327733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0705 11 157 MADS-box Gene Family AT5G13790 44.000 2.01e-27 102