Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0698 ATGGAGATCCGCCGTCGCCTTAGTAAAGAACCACCGCAGACGCTTCCGCATGGTCCCAGATCTCCAGAAACGTTCCGAAGCCCAACAAACAAGGAAGCAAATTCAGCTGGACGCCAACTACCAGAAGAGGTGAGAGAAGCTGGTTTTGGCATTGATCCTGAAGTGGTTGCGTCTATTGTTCGTGGCCACGATCATGAAGCACTGAAAACATACGGTGGAGTCAAAGAAATTGCAATGAAACTCTCTACTTCAGTAGACAAAGGTATTAACGAAGACAGTGCATATACAAGGCAACAAGTTTATGGATTCAACCGTTACACAGAAAAACCTCCCAGAAGCTTCCTGTTGTTTGTATGGGAAGCATTACATGATTTAACCCTAATAATTCTCATGGTTTGTGCTGTAGTTTCCATTGGGGTAGGGATTGCCACTGAATCGTGGCCCGGGGGTATGTATGATGGTTTAGGAATCACACTCAGTGTATTTTTGGTAGTCATTGTTACTGCAGTTAGTGACTACCAACAATCCTTACAGTTCAGGGCTTTAGACAAGGAGAAGAAGAAAATCTTCGTCCATGTCATTAGAAATGGAAAAAGACAAAAGATTTCAATCTATGACGTGGTAGTAGGAGATATAGTTTATTTGGCAACTGGGGATCAAGTTCCAGCTAATGGGATTTACATATCTGGATACAACTTGTTGATTGATGAATCAAGCTTGACAGGTGAGAGTGAACCAGTAAATGTTCATGAAGAAGACAAACCATTTCTTCTTTCAGGAACCAAAGTGCAAGATGGTCAAGGGAAAATGTTAGTGACAAGCGTTGGCATGAGGACTGAATGGGGAAAACTAATGGAAACTTTGAGCGAGGGGGAAGAAGATGAGACCCCATTGCAAGTGAAACTGAATGGAGTTGCTACAATTATTGGTAAAATTGGTTTAACTTTTGCAGTGCTGACATTTTTGGTGCTAACAATAAGGTTTGTGGGGGAAAAGGCAATTCATGGTGATATTACTAATTGGTCATCAAATGATGCAGTAAAGCTGCTAAACTTTTTTGCTATTTCTGTTACAATAATAGTTGTTGCAGTTCCAGAAGGATTGCCTTTGGCAGTGACACTTAGTCTTGCTTTTGCAATGAAAGAATTAATGAATGAGAGAGCACTTGTGAGGCATCTTTCTGCGTGTGAGACAATGGGTTCAGCGAGTTCTATTTGCACAGATAAGACAGGTACATTAACCACTAACCATATGGCGGTTGATAAAATATGGATATGTGAAAAAGCCATGGAAATCAAAGGCAATATTGAAAGTGATGGAGTAGCCAAACTAAAACAAGAGATATCTGAAGGAGTTGTAAACGTCCTTTTGCAAGCTATATTTCAGAATACTTCTTCTGAAGTAGTTAAGGATAGAGATGGAAAGAATTCAATAGTCGGAACACCAACAGAATCTGCATTATTGGAATTTGGCTTGCTTTTGGGTGGTGATTTTGATGCCCAGCGCAGAGATTATAGGATACTTGAGATTGTGCCTTTTAATTCAGTTCGAAAGAAGATGTCTGTTCTTGTAGATCTTCCTGAAGGAGGAGGGACACGAGCTTTCTGCAAAGCTTTAAGAACTCTTTGTTTGGCATTCAAAGTCATAAATGAAAACCAAGGGAAAACGAGTATCCCTGATACTGGCTACACACTGATAGCCATTGTTGGAATCAAAGATCCTGTGCGCCCTGAGGTGAAGAACGCCGTTCAAACTTGTCTAGCAGCCGGAACAACTGTTCGTATGGTCACTGGAGATAACATACATACAGCTAAGGCTATAGCTAAAGAATGTGGCATCCTCACGCAAGATGGTATAGCCATAGAAGGACCAGAATTTCGCAACTTGTCGCCTGAACAAATCAAGCATTTGATACCAAGAATCCAGGTCATGGCACGATCCTTACCGGTTGATAAGTATAACTTGGTGTCCCATTTAAGGAATACGTTTGGTGAAGTTGTTGCTGTTACCGGCGATGGAACCAACGATGCTCCGGCACTGCATGAAGCAGATATTGGACTTGCCATGGGCATCGCTGGAACAGAGGTTGCCAAACAAAATGCAGATGTGATCATTATGGATGATAACTTAAAGACAATTTTAATTGTCCTTGCCATTCTCAACTTTGAAGGCAAGAGGCTTCTCAGAATCACCGGTTCAGATGCCACTATTGTCCTAAACACTTTGACCTTCAACTCCTTTGTTTTTTGCCAGGTGTTCAATGAGATAAACAGCCGAGATATAGAAAAGATAAACGTGTTGAGATGCATAATTAAGAGCTGGATATTTATAGGGACAATTTGCATAACAGTGGGATTTCAAGTAATCATAGTTGAATTCCTGGGGAAACTTGCTAGCACAGTGCCTCTGAACTGGAAACTCTGGTTACTCAGTATCTTGATTGGAGCAATCAGCATGCCAATTTCTGCTATTGTCAAGTGCATCCCTGTTGAAAAATATTCATCACTACTCCAACATCATCATGATGGTTACCAGGAATTGCCTTCTGATCCCCACCAGCTAGCATAG 2568 0.4132 MEIRRRLSKEPPQTLPHGPRSPETFRSPTNKEANSAGRQLPEEVREAGFGIDPEVVASIVRGHDHEALKTYGGVKEIAMKLSTSVDKGINEDSAYTRQQVYGFNRYTEKPPRSFLLFVWEALHDLTLIILMVCAVVSIGVGIATESWPGGMYDGLGITLSVFLVVIVTAVSDYQQSLQFRALDKEKKKIFVHVIRNGKRQKISIYDVVVGDIVYLATGDQVPANGIYISGYNLLIDESSLTGESEPVNVHEEDKPFLLSGTKVQDGQGKMLVTSVGMRTEWGKLMETLSEGEEDETPLQVKLNGVATIIGKIGLTFAVLTFLVLTIRFVGEKAIHGDITNWSSNDAVKLLNFFAISVTIIVVAVPEGLPLAVTLSLAFAMKELMNERALVRHLSACETMGSASSICTDKTGTLTTNHMAVDKIWICEKAMEIKGNIESDGVAKLKQEISEGVVNVLLQAIFQNTSSEVVKDRDGKNSIVGTPTESALLEFGLLLGGDFDAQRRDYRILEIVPFNSVRKKMSVLVDLPEGGGTRAFCKALRTLCLAFKVINENQGKTSIPDTGYTLIAIVGIKDPVRPEVKNAVQTCLAAGTTVRMVTGDNIHTAKAIAKECGILTQDGIAIEGPEFRNLSPEQIKHLIPRIQVMARSLPVDKYNLVSHLRNTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKQNADVIIMDDNLKTILIVLAILNFEGKRLLRITGSDATIVLNTLTFNSFVFCQVFNEINSRDIEKINVLRCIIKSWIFIGTICITVGFQVIIVEFLGKLASTVPLNWKLWLLSILIGAISMPISAIVKCIPVEKYSSLLQHHHDGYQELPSDPHQLA 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0698 855 SUPERFAMILY Calcium ATPase, transmembrane domain M 72 833 IPR023298 -
Lele08g0698 855 Gene3D - 120 402 - -
Lele08g0698 855 Gene3D - 724 835 - -
Lele08g0698 855 SFLD p-type atpase 388 716 IPR044492 -
Lele08g0698 855 Pfam haloacid dehalogenase-like hydrolase 405 684 - -
Lele08g0698 855 Gene3D - 575 714 IPR023214 -
Lele08g0698 855 Gene3D - 403 415 IPR023214 -
Lele08g0698 855 FunFam Calcium-transporting ATPase 167 289 - -
Lele08g0698 855 Gene3D - 416 525 IPR023299 GO:0000166
Lele08g0698 855 Gene3D - 537 574 IPR023299 GO:0000166
Lele08g0698 855 PANTHER CATION TRANSPORTING ATPASE 39 537 - -
Lele08g0698 855 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 412 579 IPR023299 GO:0000166
Lele08g0698 855 SMART Cation_ATPase_N_a_2 64 142 IPR004014 -
Lele08g0698 855 PRINTS P-type cation-transporting ATPase superfamily signature 670 689 - -
Lele08g0698 855 PRINTS P-type cation-transporting ATPase superfamily signature 406 420 - -
Lele08g0698 855 PRINTS P-type cation-transporting ATPase superfamily signature 567 578 - -
Lele08g0698 855 PRINTS P-type cation-transporting ATPase superfamily signature 236 250 - -
Lele08g0698 855 PRINTS P-type cation-transporting ATPase superfamily signature 694 706 - -
Lele08g0698 855 PRINTS P-type cation-transporting ATPase superfamily signature 589 599 - -
Lele08g0698 855 SUPERFAMILY Calcium ATPase, transduction domain A 190 287 IPR008250 -
Lele08g0698 855 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 347 429 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele08g0698 855 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 157 329 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele08g0698 855 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 507 615 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele08g0698 855 Gene3D - 87 289 - -
Lele08g0698 855 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 66 537 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele08g0698 855 SFLD Haloacid Dehalogenase 388 716 - -
Lele08g0698 855 Pfam Cation transporting ATPase, C-terminus 737 827 IPR006068 -
Lele08g0698 855 PRINTS Sodium/potassium-transporting ATPase signature 155 175 - -
Lele08g0698 855 PRINTS Sodium/potassium-transporting ATPase signature 399 420 - -
Lele08g0698 855 MobiDBLite consensus disorder prediction 1 42 - -
Lele08g0698 855 Pfam E1-E2 ATPase 190 385 - -
Lele08g0698 855 SUPERFAMILY HAD-like 405 726 IPR036412 -
Lele08g0698 855 ProSitePatterns E1-E2 ATPases phosphorylation site. 408 414 IPR018303 -
Lele08g0698 855 Pfam Cation transporter/ATPase, N-terminus 72 137 IPR004014 -
Lele08g0698 855 FunFam Calcium-transporting ATPase 567 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0698 Lele-ChrLele08 4292990 4298830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0698 714 855 Primary Pumps ATPases AT3G57330 62.676 3.65e-50 189