Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0662 ATGCAGAGATACGGGGTTAAAGCTGTGGACAGGATCCACGTGTCCAGATGGCCACATGGAGTTCCCCGTGGAGAAGGGCAAGGCGAGGGATTATGTGTGACAGGCTGTAGAGCAAGATTGAAAGCGTGTGGTTTTGGGGGAGATCTCGGCCTTCGCCCCCGTTCCATCAAAACCAACGGTCGAGGATTTCCAAGTTTGATACGAAAGGCCTCAAGAGTCCAACGTGGAATTAAACCTTTTTGGTCGCCTCTAGCGAGGGTTTTTATAATGGGAATGGCCTGCGAGTCCCAATTTCACGTGTTGGCCGTCGACGACAGCATAATCGATCGGAAGTTTATTGAGAGGCTCCTTAAAACCTCCTCCTATCAAGTTACCACCGTTGATTCCGGTAGCAAGGCTTTAGAGTTTCTGGGTTTGCGTGACAATGATCAGACCGACCCTAATACACCTTTCGTGTTTCCTCACGGTAATCAGGAAGTGGATGTGAACCTTGTTATTACAGACTACTGTATGCCTGGCATGACTGGCTATGACTTACTCAAGAAAATCAAGGAATCTTCGTCTTTGAGAAACATACCAGTGGTGATCATGTCATCCGAAAATGTGCCTTCCAGGATTAGCAAATGCTTAGAAGAAGGAGCAGAGGAATTTTTCTTGAAACCAGTGAAGCCAGCAGATCTGAACAGGCTTAGACCCCATATGATGAAGACCCAGGAATTGAAGGATCAAGCACAAAAAAGAGATGAAAAGCTTGAAACCCCAGAGATTCAACTAGCATCACAATCACTAGTAGAACAACAACAACAACAACAACAACAGTCAGTACAGATAATCAATACTAACAAGAGGAAAACCGTGGAAGAGGGGCTTTCGCTTGAAACTGATAGAACAAGAACAAGATTCAACGGCATAGCCACTATGGTCTGA 927 0.4574 MQRYGVKAVDRIHVSRWPHGVPRGEGQGEGLCVTGCRARLKACGFGGDLGLRPRSIKTNGRGFPSLIRKASRVQRGIKPFWSPLARVFIMGMACESQFHVLAVDDSIIDRKFIERLLKTSSYQVTTVDSGSKALEFLGLRDNDQTDPNTPFVFPHGNQEVDVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISKCLEEGAEEFFLKPVKPADLNRLRPHMMKTQELKDQAQKRDEKLETPEIQLASQSLVEQQQQQQQQSVQIINTNKRKTVEEGLSLETDRTRTRFNGIATMV 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0662 308 SUPERFAMILY CheY-like 97 251 IPR011006 -
Lele08g0662 308 CDD REC_typeA_ARR 100 230 - -
Lele08g0662 308 Gene3D - 99 302 - -
Lele08g0662 308 PANTHER TWO-COMPONENT RESPONSE REGULATOR 98 282 IPR045279 GO:0009736
Lele08g0662 308 ProSiteProfiles Response regulatory domain profile. 99 235 IPR001789 GO:0000160
Lele08g0662 308 SMART REC_2 98 231 IPR001789 GO:0000160
Lele08g0662 308 Pfam Response regulator receiver domain 100 228 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0662 Lele-ChrLele08 4036244 4039097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0662 90 308 Response Regulator Gene Family AT3G57040 61.983 1.24e-90 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele08g0662 Response_reg 1.7e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0662 08 4036244 4039097 Lele08g0662 08 4036244 4039097 ECH
Lele05g0817 05 4892637 4893916 Lele08g0662 08 4036244 4039097 hybridization
Lele06g0667 06 3993793 3995123 Lele08g0662 08 4036244 4039097 hybridization