Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0645 ATGTATGCACTTTATACTAGTGCAACTATATTAGTGTGTGGGGAAAGAAAACCCCCGACCACAAGTAGTGATCTTAGAGTCTCTTCAAAGCTCTCATCTCAATTCAGTTTCTCTGTCTCTCCTTGTATATTTATATCTTCTGCACTTGTTAATTATTTTGTGGATTCCAGTGTGCTCTGTTTTTGGGTTTCTGATTTCATGGGACTCTGTCATGGAAAACCTATTGAAATCTCACAAACACATGGAGAAAATCCATTGTATCCCGATGACGAGGACGGGCTTGCAAAAATTAAAACCCCCAAATCCGCAAACTTCCCCTTTTACAGCCCAAGTCCCTTGCCAAGTCTGTTCAAGAACTCACCGGCAAATTCAAGCGTGAGCTCAACTCCTTTGCGCATTTTCAAACGCCCATTCCCTCCTCCTTCGCCGGCGAAGCACATTCGTGCATTGCTCGCTCGCCGGCATGGTTCTGTGAAGCCAAACGAGGCCTCTATCCCTGAAGGAGGCGAATGCGAGATTGGGTTGGATAAGAACTTCGGATTTTTGAAGCAGTTCGCAGCTCACTATGAACTTGGAGAAGAGGTGGGTCGTGGGCACTTTGGGTATACTTGCTCCGCCAAGGGAAAGAAAGGCAGCTTGAAGGGGCTAGATGTGGCCGTCAAAGTCATTCCAAAATCCAAGATGACAACAGCAATTGCTATAGAGGATGTACGGAGAGAAGTAAGGATATTGCGGGTTCTTACAGGACATAAGAACCTAGTGCAATTCTATGAAGCCTATGAAGACGATGAAAATGTTTATATAGTTATGGAGTTGTGCAAAGGAGGTGAGCTGCTAGATAGGATTCTTTCCAGGGGCGGGAAGTACTCGGAAGAGGATGCCAAGGTTGTCATGATTCAGATATTAAGTGTGGTGGCCTTCTGTCATCTGCAGGGTGTTGTTCATCGTGATCTCAAGCCAGAGAATTTTCTTTTTACTTGTAAGGATGAAAACGCCACGTTGAAGGCAATCGATTTTGGACTGTCTGACTATGTGAAGCCAGATGAGAGATTGAATGATATTGTAGGAAGTGCATATTATGTAGCTCCTGAAGTTTTGCATAGATCATACGGGACAGAAGCAGACATGTGGAGCATTGGTGTAATTGCTTATATTCTTTTATGTGGAAGCCGACCCTTTTGGGCTCGGACAGAATCTGGCATATTTCGTGCTGTCCTGAAGACGGATCCGAGTTTCGATGATGCTCCTTGGCCTTCTTTATCAGCTGATGCTATAGATTTTGTGAAGAGGCTGTTGAATAAGGACTATCGAAAAAGATTAACTGCAGCTCAGGCTCTCTGTCATCCTTGGCTGGCTAACCATCATGATGACTTGAAGATACCTTTCGATATGATAATCCTCAGACTTGTTAGAGCTTACATATCCTCATCTTCTTTGAGGAAATCAGCATTAGGGTCTCTCGCGAAGACATTAACAGTACCTCAGCTAGCATATCTCAGAGAACAATTTACACAGTTAGGCCCCAACAAAAGTGGATTTATTTCCATGCAGAACTTCAAGACGGCTGTTTCAAGGAGCTCCACTGAGGCCACAAAGGATTCACGGGTCTTAGATTACGCGAACATGGTTAGTTCTATCCAATACAGAAAACTAGATTTTGAGGAATTTTGTGCGGTTGCTATAAGCGTGCACCAGCTAGAGGGAATAGAGAGCTGGGAGCAACACGCTAGGCGGGCTTACGAGCTGTTTGAAAAGGATGGGAATCGACCAATCATGATCGAAGAGCTCGCCTCGGAACTAGGGCTTAGCCCATCAGTACCTGTTCATGTGGTCCTTCAAGATTGGATAAGACACTCTGATGGAAAACTCAGTTTCTTAGGATTTGTCAGACTTCTGCACGGACCTTCTTCCCGCGCAATTAACAAGGCATAA 1932 0.4462 MYALYTSATILVCGERKPPTTSSDLRVSSKLSSQFSFSVSPCIFISSALVNYFVDSSVLCFWVSDFMGLCHGKPIEISQTHGENPLYPDDEDGLAKIKTPKSANFPFYSPSPLPSLFKNSPANSSVSSTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGGECEIGLDKNFGFLKQFAAHYELGEEVGRGHFGYTCSAKGKKGSLKGLDVAVKVIPKSKMTTAIAIEDVRREVRILRVLTGHKNLVQFYEAYEDDENVYIVMELCKGGELLDRILSRGGKYSEEDAKVVMIQILSVVAFCHLQGVVHRDLKPENFLFTCKDENATLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKTDPSFDDAPWPSLSADAIDFVKRLLNKDYRKRLTAAQALCHPWLANHHDDLKIPFDMIILRLVRAYISSSSLRKSALGSLAKTLTVPQLAYLREQFTQLGPNKSGFISMQNFKTAVSRSSTEATKDSRVLDYANMVSSIQYRKLDFEEFCAVAISVHQLEGIESWEQHARRAYELFEKDGNRPIMIEELASELGLSPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGPSSRAINKA 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0645 643 Gene3D Transferase(Phosphotransferase) domain 1 279 473 - -
Lele08g0645 643 ProSiteProfiles Protein kinase domain profile. 189 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0645 643 SUPERFAMILY Protein kinase-like (PK-like) 187 516 IPR011009 -
Lele08g0645 643 Pfam Protein kinase domain 189 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0645 643 FunFam CDPK-related kinase 1 182 277 - -
Lele08g0645 643 Gene3D Phosphorylase Kinase; domain 1 182 278 - -
Lele08g0645 643 ProSitePatterns Protein kinases ATP-binding region signature. 195 221 IPR017441 GO:0005524
Lele08g0645 643 FunFam CDPK-related kinase 1 489 561 - -
Lele08g0645 643 Gene3D - 474 634 - -
Lele08g0645 643 FunFam CDPK-related kinase 3 181 353 - -
Lele08g0645 643 SUPERFAMILY EF-hand 481 634 IPR011992 -
Lele08g0645 643 ProSiteProfiles EF-hand calcium-binding domain profile. 494 529 IPR002048 GO:0005509
Lele08g0645 643 CDD STKc_CAMK 188 450 - -
Lele08g0645 643 PANTHER SERINE/THREONINE-PROTEIN KINASE 176 619 - -
Lele08g0645 643 FunFam Calcium-dependent protein kinase SK5 361 456 - -
Lele08g0645 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Lele08g0645 643 SMART serkin_6 189 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0645 Lele-ChrLele08 3904057 3909281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0645 67 640 EF-hand Containing Proteins AT3G50530 66.032 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele08g0645 Pkinase 4.2e-69 CL0016