Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0637 ATGAATATAGCCTTATCCCTTGTTCCACATAGATACTCATCTTCACCGTCACTGGTCAAGCCAATGGCCAGAGCTAACAGCAAAAGACAAAAGATTATTGACCAAATGAAAAGGATCATTGACAATGACGATGTACCTCATGCATATACAGCGTTTGAAGATACTGATTCTCCCATGTTGCTGCTCATCCTCTTGCTCTCTTCAACATTCTTCTCATTCTCCAGAATGGCATCGAGCTCAATGTCATCCTCTGGTTCATGGAGTGCCCAGGAGAACAAAGCCTTCGAAAGGGCTCTTGCAGTTTACGACAAGGACACTCCTGATCGTTGGTACAATGTTGCCAGGGCTGTTGGTGGGAAGACAACAGAGGAGGTGAAGAGGCACTATGAGATGCTCGTCCGAGACATTCAGCACATAGAATCTGGGAGAGTGCCCTTCCCCAATTACAAAAAAACTGCAGCCTTTGATGACCAAAAAAGGCTGAGAAACCTGCAGCTCCAGTGA 504 0.4583 MNIALSLVPHRYSSSPSLVKPMARANSKRQKIIDQMKRIIDNDDVPHAYTAFEDTDSPMLLLILLLSSTFFSFSRMASSSMSSSGSWSAQENKAFERALAVYDKDTPDRWYNVARAVGGKTTEEVKRHYEMLVRDIQHIESGRVPFPNYKKTAAFDDQKRLRNLQLQ 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0637 167 FunFam Transcription factor SRM1 79 146 - -
Lele08g0637 167 Gene3D - 77 146 - -
Lele08g0637 167 ProSiteProfiles Myb-like domain profile. 79 133 IPR001005 -
Lele08g0637 167 ProSiteProfiles SANT domain profile. 82 137 IPR017884 -
Lele08g0637 167 SMART sant 83 135 IPR001005 -
Lele08g0637 167 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 76 157 IPR044636 GO:0003700
Lele08g0637 167 CDD SANT 89 133 IPR001005 -
Lele08g0637 167 SUPERFAMILY Homeodomain-like 85 141 IPR009057 -
Lele08g0637 167 Pfam Myb-like DNA-binding domain 85 131 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0637 Lele-ChrLele08 3852192 3854287 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele08g0637 Myb_DNA-binding 5.9e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0639 06 3811449 3814398 Lele08g0637 08 3852192 3854287 hybridization