Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0633 ATGCCTTCAAAGGGAAAAAAGCATGTCAAGACGCAGGCGAAGCTATCCACTTCTGAAGTGGCGTCTCCTCGTACACCATCACTGACTCCTAACAGAGATTCAGATGTGAGTGAAGATGAACTTATCCTTTCTCGTGAAGAAGCTTCAAAAATATTCCCGTCTTTAATTGGCAAATCTGCTTTTGTTGGCGATCTCAGTGCCGTGGAGCTGAAATCCAAAGGCTGTAAAATTTGGCTTTCTGAGCCTTCCATGGTTTCTTCTTCCCTTGTCCCTGGTTCCACTGTGTCGGTGTCAATTGCATCTTCAAGAAAGAAAAATGTTGATTCAGATAGCTTTCCTCTAAGATCACTAACAAAAGAATGTGCCCGATGCTATGGACTGTATGCTGGGAACACTTTAGATGATGGTGCAGGAAACTACTTTGCTCTTGCAACAGTTTTTCCTTCTAGCAAGGTTTTGAAGAATGGAGTACAAATTTCACCAGAGCTTTCTTATACCATGGGATGTCCTACTTTTGGCACACATGTGTTCATTTATCAAGTGCAGAATCAATGCCTATCTTCTCTTGTAAAAGAGAAAAACGAACCACATTCTACAGAAGATAATAGCCTGGTGGCGTATGATTGCAAGGAATTGTATCTTCAGTTGGCTCCTTTGAATAATGGATTGCCCATGAAAATCAGTAACACATCACCAATAGACTTGTCTGCAGCAAAATCTCATCTTCAATTTGGGAATGAAAATGTTACTTCTCCTAAAACACCTAATGGATCGAAATTGTCTAGTTTGAGTGATTTATCTTCACCTATATTTGAAGATTCTTCTACCGTACCTAATCAAAAGAGCCAATCACTAATTTCATTTGATCTAAGGGAGGCATTGGGGGATGAAAGCTCCAAAAAACTACTGCAGACATGTGCAGCATCATGGTTGTATTCCCGTTGGTTACTAATAGGGAATATTGTGAGCATACAAATATTTTCAGAGCTATGCGTTTTCCAAGTAATAGGAGCTAAAAGGGTGTCAGTAGACCGCTGTACTCCTGATTTATCAAGTGAAATTAGTTCTTCATACCCAGAGGTTTCTGACATTTCAGAGCATATAAATCAGGCTATCATTGTCAACCGTGAAACAAAGGTATCTTTATCTTTGTCATCAAATGTGACTTCTGATGAGCTGATTCAAAGAGATTTTTCTAAGGCGGAACTCAGGGAGAAGGGCACTAAGGCTAGTGTACCTAGTAATATTTCAAAATTGGGTGGTCTTTCTAAAGAATATGCAGTTTTGAAGGATATAATTTTGTCTTCAGTAAAAAATGATCTATTAAGTAACTTTGGGTTACGAACTACAAAAGGCGTCCTTCTTCATGGTCCACCTGGCACAGGAAAGACTTCCTTAACTCAATTATGTGCTCATGATGTGGGGGTCAATCTTTTCCGAATAAATGGACCTGAAATTGTCGGCCAATATTATGGTGAAAGTGAGCAAGCATTGCACGAAGTTTTTGATTCGGCAATTCAGGCTGCACCTGCTGTGGTATTTATTGATGAGCTGGATGCTATTGCCCCTGCAAGGAAAGATGGTGGTGATGAGCTTTCTCAGAGGATGGTTGCTGCCTTATTGAATCTTATGGATGGAATTTGTAGAACTGAAGGATTACTTGTTATTGCTGCCACCAACAGGCCTGACAATATTGAGCCTGCTCTGAGGCGGCCTGGAAGATTTGACAGGGAAATTGAAATTGGTGTGCCATCTCCTCACGAACGATTGGATATGTTGCTCACTCTTCTCAGTGAGGTGGATCACACTCTTTCAGAGATACAAATTGAACATCTCGCCACAGTCACACATGGTTTTGTGGGTGCTGATCTAGTTGCCCTTTGCAAAGAGGCAGGCTTGGTTTGTCTTAGGCGTTATTTTAATTTTAAGAAAGATTGGCATAATTGCTGCTATGATGGAACATCCTCACAATATAAAGGTCAGCAACCTGCATTGCTCAAAGACTCAGAAGACTCGAGAGATCATTCAGGGCATTCAGCTTCATCTGTTTCGGAGTTATCAGTGGCTTCAAACTCTTTGATACCTTCTTGCATGATAGGTTCAACTTCTGACCATATGGAAATAGTTCCTGATACTATTGAAGATCGTAATTTGAAAGTAACTTGTGAAGATTTTCAGAAGGCAAGAATGATAATAAGACCCAGTGCCATGAGAGAGGTAATCCTGGAGGTTCCCAAGGTTAAGTGGGAAGATGTTGGTGGCCAAAAAGATGTCAAAGCCCAGCTGATGGAAGCAGTAGAATGGCCCCAGAAGCACCATGATGCATTGAAGCGTATTGGGACTCACCCTCCAAAAGGCGTGTTGATGTTTGGGCCTCCAGGTTGTAGCAAAACTCTCATGGCACGTGCAGTTGCTTCTGAAGCAGCATTGAACTTTCTGGCTGTTAAGGGTCCGGAACTCTTCAGCAAATGGGTTGGTGAATCTGAGAAGGCTGTCAAATCTTTGTTTGCAAAAGCAAGGGCGAATGCCCCATCTATTGTTTTCTTTGATGAAATAGACGGCCTTGCTGTCACTCGGGGGAAAGAAAGTGATGGTGTTTCAGTGTCAGATAGAGTCATGAGTCAACTTCTTGTTGAATTGGATGGTCTGCACGAAAGAGCTAATGTCACTGTCATTGCTGCAACAAATAGGCCAGACAAGATTGATCCTGCCCTTTTAAGACCAGGACGCTTTGACCGTCTGCTGTACTTGGGACCTCCAAATGAGATAGACAGAGAAGAGATATTCCACATCCACTTGCATAATATCCCGTGTGGTTCTGATGTAAGCCTAAAAGAACTGGCTTCTCTTACAGACGGTTGTACTGGTGCTGATATTTCACTAATATGCCGGGAGGCAGCTGTTGCAGCTATTGAGGAGAGCCTTAATGCTTCTGCGATAACAATGAAGCATTTGAAGACGGCAATTAAACAGGTCCAGCCAACAGAGATTCAGTCTTACCAACAGTTGTCATCTAAATTTCAAAGGGCTGTAGGCACCTGTGATGGAAAACATGAGGGCAGCAATATGCAGTGTTCAAGCAGATCTACTTGGCCTGGGAATTTCATAAGATCTGTCAAATTTGTTCTCCATCGGATTTCAGTGGCCATTTTCTATTTGACAACTGCTTTAAGTGGGTAG 3180 0.4198 MPSKGKKHVKTQAKLSTSEVASPRTPSLTPNRDSDVSEDELILSREEASKIFPSLIGKSAFVGDLSAVELKSKGCKIWLSEPSMVSSSLVPGSTVSVSIASSRKKNVDSDSFPLRSLTKECARCYGLYAGNTLDDGAGNYFALATVFPSSKVLKNGVQISPELSYTMGCPTFGTHVFIYQVQNQCLSSLVKEKNEPHSTEDNSLVAYDCKELYLQLAPLNNGLPMKISNTSPIDLSAAKSHLQFGNENVTSPKTPNGSKLSSLSDLSSPIFEDSSTVPNQKSQSLISFDLREALGDESSKKLLQTCAASWLYSRWLLIGNIVSIQIFSELCVFQVIGAKRVSVDRCTPDLSSEISSSYPEVSDISEHINQAIIVNRETKVSLSLSSNVTSDELIQRDFSKAELREKGTKASVPSNISKLGGLSKEYAVLKDIILSSVKNDLLSNFGLRTTKGVLLHGPPGTGKTSLTQLCAHDVGVNLFRINGPEIVGQYYGESEQALHEVFDSAIQAAPAVVFIDELDAIAPARKDGGDELSQRMVAALLNLMDGICRTEGLLVIAATNRPDNIEPALRRPGRFDREIEIGVPSPHERLDMLLTLLSEVDHTLSEIQIEHLATVTHGFVGADLVALCKEAGLVCLRRYFNFKKDWHNCCYDGTSSQYKGQQPALLKDSEDSRDHSGHSASSVSELSVASNSLIPSCMIGSTSDHMEIVPDTIEDRNLKVTCEDFQKARMIIRPSAMREVILEVPKVKWEDVGGQKDVKAQLMEAVEWPQKHHDALKRIGTHPPKGVLMFGPPGCSKTLMARAVASEAALNFLAVKGPELFSKWVGESEKAVKSLFAKARANAPSIVFFDEIDGLAVTRGKESDGVSVSDRVMSQLLVELDGLHERANVTVIAATNRPDKIDPALLRPGRFDRLLYLGPPNEIDREEIFHIHLHNIPCGSDVSLKELASLTDGCTGADISLICREAAVAAIEESLNASAITMKHLKTAIKQVQPTEIQSYQQLSSKFQRAVGTCDGKHEGSNMQCSSRSTWPGNFIRSVKFVLHRISVAIFYLTTALSG 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0633 1059 FunFam Calmodulin-interacting protein 111 584 747 - -
Lele08g0633 1059 Gene3D - 395 582 IPR027417 -
Lele08g0633 1059 Gene3D - 748 919 IPR027417 -
Lele08g0633 1059 FunFam calmodulin-interacting protein 111 isoform X1 744 919 - -
Lele08g0633 1059 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 412 638 IPR027417 -
Lele08g0633 1059 MobiDBLite consensus disorder prediction 1 37 - -
Lele08g0633 1059 FunFam spermatogenesis-associated protein 5-like protein 1 920 1003 - -
Lele08g0633 1059 MobiDBLite consensus disorder prediction 656 684 - -
Lele08g0633 1059 CDD AAA 437 582 - -
Lele08g0633 1059 FunFam Putative vesicular transport protein (CDC48) 403 582 - -
Lele08g0633 1059 ProSitePatterns AAA-protein family signature. 889 907 IPR003960 GO:0005524|GO:0016887
Lele08g0633 1059 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 745 996 IPR027417 -
Lele08g0633 1059 SMART AAA_5 449 585 IPR003593 -
Lele08g0633 1059 SMART AAA_5 783 921 IPR003593 -
Lele08g0633 1059 CDD AAA 772 919 - -
Lele08g0633 1059 PANTHER AAA-FAMILY ATPASE 73 1008 - -
Lele08g0633 1059 Pfam ATPase family associated with various cellular activities (AAA) 453 582 IPR003959 GO:0005524|GO:0016887
Lele08g0633 1059 Pfam ATPase family associated with various cellular activities (AAA) 787 917 IPR003959 GO:0005524|GO:0016887
Lele08g0633 1059 Gene3D - 920 1000 - -
Lele08g0633 1059 Pfam AAA+ lid domain 607 640 IPR041569 -
Lele08g0633 1059 Pfam AAA+ lid domain 941 986 IPR041569 -
Lele08g0633 1059 MobiDBLite consensus disorder prediction 14 32 - -
Lele08g0633 1059 Gene3D - 584 747 - -
Lele08g0633 1059 MobiDBLite consensus disorder prediction 246 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0633 Lele-ChrLele08 3811873 3820651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0633 1 1045 Calmodulin-binding Proteins AT3G56690 56.595 0.0 1032