Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0631 ATGAGGGAAGAGGACTCGAATTGGTTATCGCGATGGGAAGAGGAACTCCCTTCTCCAGATGAACTCATGCCCCTCTCCCAAACCCTAATCACTCCGGATCTTGCTATGGCTTTTGATATCCGAAATCCTCATGTCAATACCTCACAACAACTCCCTCTGCCCCCTCCTCCGTCAAATCCTCTGCCGTCTCCTGGGAATCCTACTCACCCAAACTCCACGGACTTTGCTGATTCCGGGGAATTAGGTTCTGGTATTGGAGGCGAGGAACCCGCTCGCACCCTGAAGCGTCCTCGACTCGTTTGGACTCCGCAACTTCACAAGAGGTTTGTGGACGCTGTGGCACACTTGGGGATAAAGAATGCTGTCCCCAAGACTATAATGCAGCTGATGAGTGTGGATGGGTTGACCAGGGAAAACGTGGCTAGCCACTTGCAGAAATACCGGCTTTATCTGAAGCGCATGCAAGGATTGTCCAGCGGCGGTAGTGGTAGCGGAGGAGTTGGTGGGCCATTGGCTGCTTCAGCGGATTCTGCCACTGACCATTTGTTTGCTAGCTCCCCCGTGCCACCCCATTTCTTGCATCCAACTAGGCCTAATTCGGATCACTTCTTGCCGTTTGTGCCGGTCCAGACTCTGCAGCACCACCATCACCAGCAGCACATGGTGGCGGCGGCGGCGGCCGCCGCCGCTCATCCACAGTTGCAGTCACAGTATCACAGACAGGTGGGACATTTTGGGTCACCACCAAATGGGCAGTTTGAGCATCCCTTTCTAACAAGGCAGCCTCAGGTTCAGCCACTTCACAGGATGGGAGCTCCAATGCACAATCCAGTAACTGCTAATTATGTGGAGGACATGGAATCGGCCAACGCTGCAGGAGCGAGAAAGGTTCTTACTTTATTTCCTACTGGAGATGATTGA 921 0.5342 MREEDSNWLSRWEEELPSPDELMPLSQTLITPDLAMAFDIRNPHVNTSQQLPLPPPPSNPLPSPGNPTHPNSTDFADSGELGSGIGGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGSGSGGVGGPLAASADSATDHLFASSPVPPHFLHPTRPNSDHFLPFVPVQTLQHHHHQQHMVAAAAAAAAHPQLQSQYHRQVGHFGSPPNGQFEHPFLTRQPQVQPLHRMGAPMHNPVTANYVEDMESANAAGARKVLTLFPTGDD 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0631 306 MobiDBLite consensus disorder prediction 49 67 - -
Lele08g0631 306 SUPERFAMILY Homeodomain-like 93 153 IPR009057 -
Lele08g0631 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 152 IPR017930 -
Lele08g0631 306 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 97 149 IPR006447 GO:0003677
Lele08g0631 306 MobiDBLite consensus disorder prediction 1 23 - -
Lele08g0631 306 MobiDBLite consensus disorder prediction 1 18 - -
Lele08g0631 306 FunFam Two-component response regulator 92 155 - -
Lele08g0631 306 Pfam Myb-like DNA-binding domain 100 148 IPR001005 -
Lele08g0631 306 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 258 IPR044841 GO:0003700|GO:0006355
Lele08g0631 306 MobiDBLite consensus disorder prediction 45 91 - -
Lele08g0631 306 Gene3D - 93 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0631 Lele-ChrLele08 3808231 3809151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0631 1 306 G2-like Transcription Factor Family AT3G10760 59.053 1.88e-99 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele08g0631 Myb_DNA-binding 2.3e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0631 08 3808231 3809151 Lele08g0631 08 3808231 3809151 ECH
Lele05g0790 05 4675624 4690604 Lele08g0631 08 3808231 3809151 hybridization
Lele06g0632 06 3767072 3767998 Lele08g0631 08 3808231 3809151 hybridization