Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0620 ATGTCAGATAGATTAACCCTAGGCGATTCTGACCACAGAAAGCTTAAGCACAAGATGATTGGGGAGTCATCGGAGCCGCCACCACCTTCCATGGACGCCGACGACTCAGAGGGGCTTCTGACTCTGAAGCTGATGGTGGGCGAACCAACGGAGGCCTCTAACAACGAAGAGATAACGACAAGTAATAATAATCAGCAGCGAATATTCTCTTGCAAGTTCTGCGACAAGAAATTCCATAGCTCTCAAGCTCTGGGAGGGCACCAGAATGCTCACAGACGTGAGAGTGTACTCAGCAAAATTAACAAAGAGCTTGATATGGGCACTTTTGGACGCGTTGGTCCTCACTTCTGCCCTTATTACTCAACCATCGCTGGTCTTCCCTTCGCCGGGTCACCTTTTTATCCAGGGCTTCATCATCACATGAACCCATCACTGGCTCATTACGGCTTGCAGCAGGGGCCAGCCAACTCGGCACTAGAGGCGTTCCGGTTCGGCTCGAGAAGCTCCTGGGCCGCCGAAGAAGGAGCGGTTCAACGCAGAGGGAATCGCAGAAGCAATGTTCAGAATTCTTCATCACCTGAAAATACAAAGCCAGGTGAATCATCGGGAGGAGCAACTGCAGGTGTCGGAGGCTCCGAGAGGAACTCATATATGGGAAGCATTCATAATACATCATCAGGCCTCGACTTGTCTCTCAGTCTTTAA 705 0.5064 MSDRLTLGDSDHRKLKHKMIGESSEPPPPSMDADDSEGLLTLKLMVGEPTEASNNEEITTSNNNQQRIFSCKFCDKKFHSSQALGGHQNAHRRESVLSKINKELDMGTFGRVGPHFCPYYSTIAGLPFAGSPFYPGLHHHMNPSLAHYGLQQGPANSALEAFRFGSRSSWAAEEGAVQRRGNRRSNVQNSSSPENTKPGESSGGATAGVGGSERNSYMGSIHNTSSGLDLSLSL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0620 234 Pfam C2H2-type zinc finger 69 94 - -
Lele08g0620 234 Gene3D Classic Zinc Finger 52 106 - -
Lele08g0620 234 MobiDBLite consensus disorder prediction 216 234 - -
Lele08g0620 234 MobiDBLite consensus disorder prediction 181 202 - -
Lele08g0620 234 SUPERFAMILY beta-beta-alpha zinc fingers 66 95 IPR036236 -
Lele08g0620 234 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 49 234 IPR044246 GO:0009788
Lele08g0620 234 MobiDBLite consensus disorder prediction 174 234 - -
Lele08g0620 234 MobiDBLite consensus disorder prediction 1 21 - -
Lele08g0620 234 MobiDBLite consensus disorder prediction 1 38 - -
Lele08g0620 234 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
Lele08g0620 234 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 96 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0620 Lele-ChrLele08 3755213 3755917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0620 40 234 C2H2 Transcription Factor Family AT1G24625 31.188 2.08e-14 67.8